KEGG   Sulfurisphaera ohwakuensis: D1869_00625
Entry
D1869_00625       CDS       T06310                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
soh  Sulfurisphaera ohwakuensis
Pathway
soh03030  DNA replication
soh03410  Base excision repair
soh03420  Nucleotide excision repair
soh03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:soh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D1869_00625
   03410 Base excision repair
    D1869_00625
   03420 Nucleotide excision repair
    D1869_00625
   03430 Mismatch repair
    D1869_00625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:soh03032]
    D1869_00625
   03400 DNA repair and recombination proteins [BR:soh03400]
    D1869_00625
Enzymes [BR:soh01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     D1869_00625
    6.5.1.6  DNA ligase (ATP or NAD+)
     D1869_00625
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     D1869_00625
DNA replication proteins [BR:soh03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    D1869_00625
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     D1869_00625
DNA repair and recombination proteins [BR:soh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     D1869_00625
   NER (nucleotide excision repair)
    Other NER factors
     D1869_00625
   MMR (mismatch excision repair)
    Other MMR factors
     D1869_00625
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: QGR15860
UniProt: A0A650CDE1
LinkDB
Position
complement(96526..98328)
AA seq 600 aa
MEFKLIAEYFDKLEKISSRLQLTALLTDLFKKADKNVIDKVVYLIQGKLWPDFLGYPELG
VGEKLLIKAISIAVNVKEEVVEEQLKVVGDLGEVAMRLKKTPQSASILSFLGAQSNEGLT
VEETYESLTKIALASGEGSRDIKIRSLAGLLKKASPLEAKYIVRFVDGRLRVGIGDATIM
DALSTAFTGSTSFRPLIERAYNLRADLGNIAKIIAQQGVEALKDIKPQVGIPIRPMLAER
MSDPAEILAKVGGEALVDYKYDGERAQIHKKDKEVYIFSRRLENITRMYPDVVEYVREYI
NANEVIIEGEIVAVDPESNEIRPFQELMHRKRKNDINEAIKEYPVNVYLFDLMLYEDADY
TMKPLPERRKKLEEVIKPNDKLHIAHHIYTNNVDKLMEFFYDAISNGAEGVMVKSVAKDS
IYQAGSRGFLWIKLKRDYQSEMADSVDLVVVGAFYGRGKRGGKLSSLLMAAYDPETDTFK
TVCKVASGFSDAELDELQKKLMEIKLDKKDPRVDSQLEPDIWVEPKYVAEIIGAEITLSP
EHTCCKDMVSKGAGLSVRFPRFIRWRDDKSIEDATTPKEIYEMYKMKLRKKEEEQHTDEA
NT seq 1803 nt   +upstreamnt  +downstreamnt
atggagtttaaactcatagctgagtactttgataaacttgagaagatatcttcaaggctt
caacttaccgcattactaactgatctgtttaaaaaggctgataaaaatgtcattgataag
gtagtttatttaattcagggtaaattgtggccagactttttaggctatccagagttagga
gttggtgaaaaattacttattaaagcaatttcgattgctgtgaatgtcaaagaggaagta
gtagaagagcaattgaaagttgttggtgacttaggagaagttgcgatgagacttaagaaa
actcctcagtctgcctcaattttaagcttcttaggtgctcaatcaaatgaaggtttaacc
gttgaagaaacttatgagtctttgactaaaatagcgttggcttcaggtgagggtagtaga
gatattaaaattagatctttagctgggttactaaagaaggcttctcctttagaagcaaaa
tacatagttaggttcgtagatggaagattaagagttggaatcggtgatgccacaataatg
gatgcactatcaacagcatttaccgggagtacttcatttagaccattaatagaaagagca
tataatttaagagcggatctaggtaatattgcaaaaattattgcgcaacaaggcgtagaa
gctttaaaggacattaaacctcaagtaggaattcctataaggcctatgttagccgaaaga
atgagtgatcctgcagagattttagctaaagtaggcggtgaagctttagtagattacaaa
tatgatggggaacgtgcacaaatacataaaaaggataaagaagtatatatattctctaga
agattggagaatattactagaatgtatcctgatgttgtggaatatgtaagagaatacata
aacgctaatgaagttataatcgaaggagagatagtagctgtagacccagaaagtaatgag
attagaccatttcaagagttaatgcataggaaaagaaagaatgatataaatgaagctata
aaggaatatccagtaaacgtttatctttttgatttaatgctttatgaagatgcagattat
accatgaagcctttgccagaaagaaggaagaaactagaagaagttattaaaccaaatgat
aaattacatatagctcatcatatttatacaaataatgtagataaactgatggaattcttt
tatgatgctataagcaatggagcagaaggtgtaatggtgaaatcggttgctaaagattct
atatatcaggcaggttctagaggtttcttatggattaaactgaagagagattatcaaagc
gagatggctgacagcgttgatctagtagtagtaggagcattttatggaagaggaaaaaga
ggaggtaaattgagttcattattaatggctgcatatgacccagagacagatacatttaaa
actgtatgtaaagtagcatctggctttagtgatgctgaattagatgaattgcaaaagaaa
ttaatggagattaagttagataaaaaagatccaagagttgattcacaattagaacctgat
atatgggttgaacctaaatatgttgctgaaattataggtgcagaaataacactatctcca
gaacacacgtgctgtaaagatatggtgtctaaaggtgcaggattatcagtaagatttcct
agatttataagatggagggatgataaaagcatagaagatgctacaactcctaaagaaatt
tacgaaatgtataaaatgaaattgagaaagaaggaagaagaacagcacactgatgaagca
taa

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