Shinella oryzae: K6301_09060
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Entry
K6301_09060 CDS
T08112
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
soj
Shinella oryzae
Pathway
soj01501
beta-Lactam resistance
soj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K6301_09060
01503 Cationic antimicrobial peptide (CAMP) resistance
K6301_09060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_09060
01504 Antimicrobial resistance genes [BR:
soj01504
]
K6301_09060
Transporters [BR:
soj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K6301_09060
Antimicrobial resistance genes [BR:
soj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K6301_09060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
UPA23347
LinkDB
All DBs
Position
complement(1831308..1834445)
Genome browser
AA seq
1045 aa
AA seq
DB search
MPSFFIDRPIFAWVVAIFIMIAGAISIPLLPISQYPDVAPPQISVSTSYAGASSQDTYQS
VTKLIEDELNGVEGMLYFESTSSASGSAEINITFAPGTDPSQASVDVQNRVSRVEPRLPD
SVRRQGVQVEEAGSGFLLIVSLTSTDGSMDAIGLGDYLNRNILSEVQRVPGVGRAQLFST
QRSMRIWLDPAKMLGLNLTAADITAAVQAQNAQIAAGSIGAQPNPITQQIAAPVNIRGQL
TTPEEFGAIVLRANADGSAVRLRDVARVEVGGETYSFSTRLNGQPSAAIGVQLSPSGNAM
STSAAIKARMDELSKFFPPGLEYSIPYDTSPFVKVSIEKVLHTLLEAVGLVFLVMFLFLQ
NIRYTIIPTLVVPVALLGTCAVMLAMGFSINVLTMFAMVLAIGILVDDAIIVVENVERIM
SEEGLPPKEATRKAMKQITGAVIGITLVLASVFIPMGFFPGAVGVIYQQFSLTMVVSILF
SAFLALSLTPALAGSFLKQVPKGHHHAKGGFFGWFNRGFDRTSKGYSGSVSWLVRRAGRF
MIIYLAILAGLGYMFMKLPSSFLPDEDQGFVIVMMQLPSEATGHRTDEVLSQTEKIFGQE
AAVDKIVGINGFSFFGAGQNAGLAFVTLKDWSERGPEDAAQAIAGRASMAMSQIKDAISF
ALSPPPIQGLGTTGGFSFRLQDRGGLGQEALSAAGQQLLGLAAQSDIVAGVRVEGMPDAA
QVNVMIDREKANTFGVTFADINTTISTNLGSTYVNDFPNAGRMQRVTVQADQNERMQVAD
LLNLNVRNASGGMVPISAFATAEWVRAPTQTVGYNGYPSIRFSGDTKPGFSSGDAIAEMQ
RLAAQLPPGFGYEWTGQSLQEIQSGSQAPILVGLSILLVFLCLAALYESWSIPFAVILVV
PLGVIGAVIAVTLRDMSNDVYFKVGLIAIIGLSAKNAILIIEFAKELMEDGRSLIDATIE
ACHLRFRPILMTSLAFTLGVLPLAIATGASAGSQRAIGTGVMGGMITATVLAIFFVPIFF
VFVMKLFGYGRKKEEPAPAATNPAE
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgcccagttttttcatcgacaggccgattttcgcctgggtggtcgcgatcttcatcatg
atcgcaggcgccatctccatcccgttgctgccgatctcgcagtatccggatgtcgctccg
ccgcagatttccgtttccacctcttatgccggcgcgtcgtcgcaggacacctaccagagc
gtcaccaagctcatcgaggatgagctgaacggcgtggaaggcatgctctatttcgaatcg
acctcgagtgcgtcgggttcggccgaaatcaacatcaccttcgcgccgggcaccgatccg
tcgcaggcctcggtggacgtgcagaaccgtgtcagccgcgtcgagccgcgtcttcccgac
tcggtccgccgccagggcgtgcaggtcgaggaagccggttcgggcttcctgctgatcgtg
tcgctgacctccaccgacggctcgatggacgcgatcggtctcggcgactacctcaaccgc
aacatcctctcggaagtgcagcgcgtacccggcgtcggccgtgcgcagctgttttccacc
cagcgttccatgcgtatctggctcgatcccgccaagatgctcggcctcaacctgacggca
gccgacatcacggccgctgtccaggcgcagaacgcgcagatcgcagcgggttcgatcggc
gcgcagcccaatccgatcacccagcagatcgccgctcccgtcaacatccgcggccagctg
accacgccggaagagttcggcgccatcgtgctgcgcgccaatgcggacggttcggccgtg
cgcctgcgcgacgttgcgcgcgtggaagtgggcggcgagacctactcgttctccacgcgc
ctcaacggccagccttccgccgccatcggcgtgcagctttcgccgagcggcaacgccatg
tcgacatcggcagcgatcaaggcgcgcatggacgaactgtcgaagttcttcccgccgggc
ctcgaatactcgatcccctatgacacctcgcctttcgtgaaggtgtcgatcgagaaggtg
ctgcacacgctgctggaggccgtgggtctcgtgttcctcgtgatgttcctgttcctgcag
aacatccgctacacgatcattccgacgctcgtcgttcccgtcgcgctgctcggcacctgc
gccgtcatgctcgccatgggcttctcgatcaacgtgctgaccatgttcgccatggtgctc
gcgatcggcattctcgtcgacgatgccatcatcgtcgtcgaaaacgtcgagcgcatcatg
tcggaagaggggctgccgccgaaggaggcgacccgcaaggcgatgaagcagatcaccggc
gccgtcatcggcatcacgctggtgctcgcctcggtgttcattccgatgggcttcttcccc
ggcgcggtgggcgtcatctaccagcagttctcgctgaccatggtggtgtcgatcctgttc
tcggcgtttctggcgctctcgctgacgcctgcgcttgccggcagcttcctgaagcaggtg
ccgaaggggcatcatcacgcgaagggcggcttcttcggttggttcaaccgcggcttcgac
cgtacgtcgaagggctatagcggcagcgtcagctggctcgttcgtcgcgccggccggttc
atgatcatctacctcgcgatcctcgcgggcctcggctacatgttcatgaaactgccgtcc
tcgttcctgccggatgaggaccagggcttcgtcatcgtcatgatgcagcttccttcggaa
gcgaccggccaccgcacggatgaagtgctcagccagaccgagaagatcttcgggcaggag
gctgcggtcgacaagatcgtcggcatcaacggcttctcgttcttcggtgcgggccagaat
gccggccttgccttcgtgacgctgaaggactggagcgaacgcgggcctgaagatgccgcg
caggcgatcgccgggcgggccagcatggcgatgagccagatcaaggatgcgatcagcttc
gcgctgtcgccgccgccgatccagggcctgggcacgactggcggtttctccttccgcctg
caggaccgtggcggtcttggccaggaagccttgtcggccgccggccagcagctgctcggc
ctcgccgcgcagagcgatatcgtcgccggtgtgcgtgtggaaggcatgcccgacgcggcg
caggtcaatgtcatgatcgatcgcgagaaggccaacaccttcggtgtgaccttcgccgat
atcaacacgacgatctcgaccaacctcggctccacctatgtgaacgacttcccgaatgcc
ggccgcatgcagcgcgtgacggtgcaggcagaccagaacgagcgcatgcaggtcgccgac
ctcctgaacctcaacgttcgcaacgcgagcggcggcatggtgccgatctcggccttcgca
accgccgaatgggtgagggctcccacgcagacggtgggttacaacggctatccgtcgatc
cgcttcagcggcgacaccaagccgggcttctcctcgggcgatgccatcgcggaaatgcag
cggctcgccgcccagcttccgccgggcttcggctatgagtggaccggacagtcgttgcag
gaaatccagtccggttcgcaggcgccgatcctcgtcggcctctcgatcctcctggtcttc
ctgtgccttgcggcgctctatgaaagctggtcgatcccgtttgcggtcatcctcgtcgtg
ccgctcggcgtcatcggcgcggtcatcgcggtcacgctgcgcgacatgtcgaacgacgtg
tacttcaaggtcggcctgatcgcgatcatcggcctctcggcgaagaacgcgatcctgatc
atcgagttcgccaaggagctcatggaggacggccggtcgctcatcgatgcgaccatcgag
gcctgccacctgcgcttccggccgatcctgatgacctcgctcgccttcacgctcggcgtt
ctaccgctcgcgatcgccaccggtgcgagcgcgggcagccagcgcgccatcggtaccggc
gtgatgggcggcatgatcaccgcgacggtgcttgccatcttcttcgtgccgatcttcttc
gtcttcgtgatgaagctgttcggatacggaagaaagaaggaggagccggctccggcggcg
accaacccggccgagtaa
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