Shinella oryzae: K6301_18440
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Entry
K6301_18440 CDS
T08112
Name
(GenBank) DUF4038 domain-containing protein
Organism
soj
Shinella oryzae
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Gene cluster
GFIT
Motif
Pfam:
DUF4038
Collagen_bind_2
Motif
Other DBs
NCBI-ProteinID:
UPA27529
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Position
pZ25:complement(496897..498231)
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AA seq
444 aa
AA seq
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MRTIGFTLLIGLMLLAGRVMPAGAEARFPLRIAALGTYLEDAAGKPFLITGDAAWSLIAD
LPPEDADLYIADRKARGFNTILVSLIEHEFARNAPNNAAGVAPFLAPGDFARPNDRYFAD
AEHVLDAALRAGMLVLLAPAYTGANGGPQGWYAEMAAAGPETLRAYGRYIGKRYARYPNI
IWVQGGDYDPPDRALVDALALGIEEGAPGAMQTVHGNRDSATAAYWPDAKWLSIDTVYTY
EDVAAAVQARYRAGPHRPFFMIESRYEGEHGVKAAEIRKIAYGALLSGASGQVFGNNPVW
HFSGPALYDTPEGWRQALDSEGAKSIGHLAGLFERFDWWKLKPDDGRFVRHIEGIPSANA
IFAVAGDGTFAAAYVQGVAALDLDPAVLAAATDAVEWYDPATGALAATEPEADLRRLVVP
TSSRASSATDWLVVLRAAGGLRDN
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcggaccattggttttaccctactgatcggcctcatgttgctggccggtcgcgtcatg
ccagccggtgccgaggcgcgctttcccctgcgcatcgccgctttaggcacatatctggag
gatgcggccggaaagccgttcctcatcacaggcgatgcggcctggtcgctgatcgccgat
cttccgcccgaggatgccgatctctacattgccgatcgaaaggcgcgagggttcaacacc
atcctggtctcgctgatcgagcatgaattcgcgcgcaacgcgccgaataacgcagccggc
gtcgcgcctttcctggcgccgggtgacttcgcgcgaccgaatgatcgctatttcgccgat
gccgagcacgtccttgatgccgcgcttcgggccggcatgctggtgctgctggcaccggcc
tataccggtgcgaacggtgggccacagggctggtatgcggagatggcggcggcggggccg
gagaccttgcgtgcttacgggcgctatatcggcaagcgctatgcccgctatcccaacatc
atctgggtgcagggcggtgactacgatccaccggaccgtgcgctggtcgatgcattggcg
ctgggcatcgaggagggggcgccgggcgcgatgcagaccgtccacggcaatcgcgacagc
gcgacggccgcctattggcccgatgcgaaatggctgtccatcgatacggtctacacctac
gaggatgtcgcggccgccgtgcaggcacgctatcgggccgggccgcaccggccgttcttc
atgatcgagtcgcgctatgaaggagagcatggggtcaaggcggccgaaatccgcaagatc
gcctatggtgcgcttctgtcgggtgcgagcggccaggttttcggcaacaaccccgtctgg
catttcagcggccccgctctctacgacacgccggagggatggcggcaggcactcgatagc
gaaggggcaaagagcatcggccatctggcgggcctgttcgagcgcttcgactggtggaaa
ctgaaaccggacgacgggcggttcgtgcgtcatatcgaaggcataccgtccgccaatgcc
atattcgccgtcgcaggcgatggaacctttgccgccgcctacgtccagggcgtcgccgcg
ctcgatctcgaccctgcggtcctggcggccgcgaccgacgccgtcgaatggtacgatccc
gcgaccggtgcactcgccgccacggagcctgaagccgacctgcgacgactggtggtgccg
acatcctcgagagcatccagcgccacggactggctggtcgttctgcgggcggcgggtggc
ctgcgggacaattag
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