Shinella oryzae: K6301_18495
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Entry
K6301_18495 CDS
T08112
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
soj
Shinella oryzae
Pathway
soj00521
Streptomycin biosynthesis
soj00523
Polyketide sugar unit biosynthesis
soj00541
O-Antigen nucleotide sugar biosynthesis
soj01100
Metabolic pathways
soj01110
Biosynthesis of secondary metabolites
soj01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
K6301_18495 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
K6301_18495 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
K6301_18495 (rfbC)
Enzymes [BR:
soj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
K6301_18495 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UPA27539
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Position
pZ25:510871..511416
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AA seq
181 aa
AA seq
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MLFTRTDLEGVWLIEASPIRDERGSFVRTFCIDEMDLRGLEHHFVQHSLSRSTAKHTLRG
LHFQHAPHAEVKVVSCLNGAIWDVAVDLRPQSPTYRRWTAAELSADNMRQLYIPKGCAHG
FLSLTEDAVVGYLISTRYDPSAAAGLRYDDPALAIDWPAAPAVMSEKDRSWPLLADSVHH
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcaccagaaccgacctggaaggcgtatggctgatcgaagcgtcgccgatccgt
gacgagcgaggctcgttcgtcaggaccttctgcatcgacgagatggatctccgcgggctc
gaacaccacttcgtccagcacagcctttcgcgctcgacggccaagcacacgctgcgtggc
ttgcatttccagcacgcgccgcatgcggaggtaaaggtggtgtcctgcctgaacggcgcg
atctgggacgtcgccgtcgaccttcgcccacaatcgccgacctatcgccgctggacggca
gcggaactcagcgccgacaacatgcgccagctctatattcccaagggatgcgcccacggt
ttcctgtcgctgacggaggatgcggtggtcggctatctcatatcgacgcgctacgatccg
tccgccgccgccggcctgcgctatgatgatcccgcccttgcgatcgactggccggcagca
ccggccgtgatgtcggaaaaggacaggagctggccgctgcttgcggacagcgtacatcac
gcctga
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