KEGG   Shinella oryzae: K6301_23155
Entry
K6301_23155       CDS       T08112                                 
Symbol
lhgO
Name
(GenBank) L-2-hydroxyglutarate oxidase
  KO
K15736  (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
Organism
soj  Shinella oryzae
Pathway
soj00310  Lysine degradation
soj01100  Metabolic pathways
soj01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:soj00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    K6301_23155 (lhgO)
Enzymes [BR:soj01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.5  With a quinone or similar compound as acceptor
    1.1.5.13  (S)-2-hydroxyglutarate dehydrogenase
     K6301_23155 (lhgO)
SSDB
Motif
Pfam: DAO Epimerase GDP_Man_Dehyd RmlD_sub_bind 3Beta_HSD NAD_binding_4 NAD_binding_10 Polysacc_synt_2 Pyr_redox_2 NAD_binding_8 Sacchrp_dh_NADP FAD_binding_3 KR Thi4 Mqo
Other DBs
NCBI-ProteinID: UPA26827
LinkDB
Position
pZ25:1500216..1502381
AA seq 721 aa
MYDYCVIGAGIVGLATAPEISRLKPDAKIVVLDKEAGPATHQTGHNSGVIHSGLYYKPGS
LKARLCREGAMAMKAFCIENAVPYREIGKLIVATSPVEVERMQALRRNAAENGIAAQEIG
AGELRELEPNIEGLAALRIGESAIVSYRRVCEVMVGKLATAGVRIEFGSAVRAIVESGRD
VAIETGKGRVTCRWLIACAGLQADRIAAIAGVALEHRIVPFRGEYFDVVRPYTATLVSHM
IYPVPDPALPFLGIHLTPMIDGRLTVGPNAVLSLARESYAGNWPSLHDMAAYASFPGFWK
MLRANLSSGIREARSSLFRGRYLQECRKYCPSLQLGDLKPYPPGIRAQAVSRDGALVHDF
LFKRTSRSLHVLNAPSPAATSSIPIGRMIAETLGIAVSNRHWSTGMSLPSTPRPHVLVTG
ASGLVGGAVVRQLRDRGQALTAIDKFAGAIAGVPVIDCDLRDIHRLHAIAGGARTNAIVH
CGGYSGPMVGRENPYDMIAVNVTGTANLLELARVGAYGRFVYCSSMSVYGSTTAGPVGEM
SPLSPSTVYGATKLAAEQLVLAYAREHGVDAAALRLSWIYGPDRSTACILRRMIDDSFEA
RPTRQDWGADFPRQYIHADDAARAVLAALDTPALESRLYNITGESLVTLGDVAALVREFL
PAADIALAPGAAPDDDYHHQFDTTAARRDLGFVPEIPLRRGVETMVAELRRRRAEKNVRP
C
NT seq 2166 nt   +upstreamnt  +downstreamnt
atgtacgattattgtgtcatcggagcgggcattgtcggactggcaacggcgccggaaatc
tcccgcctgaagcccgatgccaagattgtcgtgctcgacaaggaggccggcccggcgacg
catcagaccggccacaacagcggcgtcatccatagcggcctttactacaagccgggcagc
ctgaaggccaggctatgccgcgagggtgcgatggcgatgaaggccttttgtatcgaaaac
gctgtgccctatcgggagatcggcaagctgatcgtggcgaccagtccggtcgaggtcgag
cggatgcaggcgctgcgccgcaatgctgccgaaaacggcatcgcagcgcaggaaatcggc
gctggcgaattgcgcgaactggagccgaatatcgaaggcctggcggcgctccggatcggc
gaaagcgccatcgtcagctaccgccgcgtctgcgaggtgatggtcggtaagctggctacc
gctggcgtcaggatcgaatttggttccgccgtgcgcgccatcgttgagagcggtcgtgat
gtcgcgatcgaaaccggtaagggcagagtgacctgccgttggctgattgcctgcgcgggc
ctacaggccgaccggatcgcggccatagccggagtggcgctcgagcataggatcgtaccg
ttccgcggcgagtatttcgacgttgtacggccgtacaccgcgacgctggtcagtcacatg
atttatccggtgccggatccggcactgccctttcttggcatacacctgacacccatgatc
gacggccggctgacggtcggcccgaatgcggtcttgtcactggcgcgcgaatcctatgcc
ggcaactggccaagcctgcacgacatggccgcctacgcctcctttcccggtttctggaag
atgctgcgcgccaatttgtcgtcgggcatccgggaggcgagaagctcgctgtttcgcggc
cgctacctgcaggaatgccgcaaatattgtccgtcgctgcaactcggcgaccttaaaccc
tatccgccgggtatccgggcgcaggccgtgtcgcgcgacggcgcgctggtgcatgatttt
ctattcaagcggacatcgcgcagcctgcatgtcctcaacgccccgtcgccggcggcgacc
tcgtcgatcccgatcgggcgcatgatcgccgaaacgctcggcattgccgtctcgaaccgt
cattggagtaccggcatgagcctgccatcgaccccgcgacctcacgtgctcgtcaccggc
gctagcgggctggtcggtggcgccgtggtccggcaattgcgcgaccggggccaggccctg
accgcgatcgacaagtttgccggtgcaatcgccggtgtgccggtgatcgattgcgacctg
cgcgacattcatcgcctgcatgcgatcgccggcggcgcccgtacaaacgccatcgtccat
tgcggcggctattccggcccgatggtcggccgcgagaatccttatgacatgatcgccgtc
aacgttaccggcacagccaacctgctggaactggcgcgggtcggcgcttacggccgcttc
gtctattgctcgtcgatgagcgtctatggatcgactacggcaggaccggttggcgaaatg
tcgccgctgtcgccctcgacggtctatggcgccaccaagctcgccgccgagcagctggtg
ctggcctatgcccgcgaacacggcgtcgatgccgcggccctcaggctgtcctggatctat
ggtcccgatcgcagcaccgcttgtattctcaggcggatgatcgacgactcgttcgaggcc
agaccgacgcgccaggattggggtgcagattttccaagacaatatattcatgccgacgat
gccgcccgcgccgtgctggcggcgctggacacgccggcgctcgaaagccgcctctacaac
atcaccggcgagagcctcgtcacgctcggcgatgttgccgcgctggtgagggagttcctg
ccggccgccgatatcgccttggcgccgggcgcggcgcccgacgacgattatcaccaccag
ttcgacactaccgccgcccgccgcgatctggggttcgtgccggaaattccgctgcgccgc
ggcgtcgagaccatggtcgccgaattgcgccgccgccgtgccgaaaagaatgttcgccca
tgctga

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