Shinella oryzae: K6301_23750
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Entry
K6301_23750 CDS
T08112
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
soj
Shinella oryzae
Pathway
soj01501
beta-Lactam resistance
soj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K6301_23750
01503 Cationic antimicrobial peptide (CAMP) resistance
K6301_23750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_23750
01504 Antimicrobial resistance genes [BR:
soj01504
]
K6301_23750
Transporters [BR:
soj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K6301_23750
Antimicrobial resistance genes [BR:
soj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K6301_23750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Patched
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
UPA26934
LinkDB
All DBs
Position
pZ25:complement(1635764..1638898)
Genome browser
AA seq
1044 aa
AA seq
DB search
MSLFFINRPIFAWVIAVCVMLAGILSISSLSISQYPQIAPTSVTVSATYSGADAQTVENS
VTKVIEQGMTGIDNLDHMTSTSTSTGEASVELTFTNQADPDVAQMQVQNKLQQVESSLPT
AVQTAGVTVTKSSSSFLLIAAFVSNDGKLSATDISDYINSTLKDRIARVEGVGDTRLFGS
GYAMRIWLDPDKLSKYSLTVSDVTSAIEAQNTQVSAGQLGAAPQRKGQQLNATVTAKSRL
QTPEEFENIILKSQTDGSLVQMSDVATVELGAESYTTTTKYNGKPASGIGVNLATGANAI
DTANGVKSAIEAMKPTMPQNVDVVYPYDTTPFVELSIQDVIKTLGEAIVLVFVVMFIFLQ
SFRATIIPTLAVPVVLLGTFGILSLFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
EEEGLDPKAATIKSMKEISSALIGIATVLSAVFIPMAFFSGSVGIIYRQFSVTIVSAMVL
SVGVALIFTPALCATLLCPPKHEAKNKGLFGWFNRGFERTSSAYQKSIGGIVRRSPVFLV
IFVAMVAVAAYTFTRMESSFIPDEDQGVLIASVQLPPGATEDRTRKMLDDVTNYFLNDEK
EYVEGVMSSVGFSFGGAGQNVGIAFISLKDFEGRTDENAKAGAIAGRAMGAFSKFSDGSA
FALQPPAIPGFGTSGGFSFYLMDSNSAGHAALIDVRNQLLAAAGKDTQLVGTRPNGQEDT
PQYSIQIDDRKASALGLQISDINNTLSTAWGGSYVNDFIDRGRVKPVYVQSATDFRMQPE
DLGRWYAKNSSDTMVPFSSFATGKWTYGSPRLERFNGVSAVEIQGSAAPGVSSGTAMTAI
DDLMQELPAGYQHEWTGLSAQERLSGNQALQLYAISVLVVFLALAALYESLTIPFAVLLS
VPIGIFGAVVAATLFGQTNDVYFKVGLLTTIGLAAKNAILIVEFAIEQQAHGKSLIEATL
EASRQRLRPILMTSFAFILGVLPLAVADGAGSGAQNSIGIGVMGGMISATVLGVFFIPLL
FVTVRRIFRSRSRNTAAATVAPTE
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtttttcatcaaccgtcccattttcgcgtgggtcatcgcggtttgcgtgatg
ctggcaggtatattatcgatcagctcactctccatatctcaatatcctcagatcgcgccc
acgtcggtcacagtgagtgcgacctactccggcgcagatgcgcagacggtcgaaaactcc
gtcaccaaggtcattgaacagggtatgaccgggatagacaatctcgatcacatgacgtcc
acatcgacctcgaccggtgaagcctcggttgaactgacattcaccaaccaggcagacccg
gacgtcgctcagatgcaggtgcaaaacaagctgcagcaggtcgaatcgagtttgccgacg
gcggtgcagacggccggggtgacggtcaccaaatcctcgtccagcttccttctcatcgcg
gcattcgtctcaaatgacggtaagctgagcgcaacagatatctctgattatatcaacagc
acgctcaaggaccgcatcgcccgcgtcgaaggcgtcggcgatacccggctgttcggttcg
ggatatgccatgcgtatctggctggatcccgacaaattgtcgaagtattcccttacggtt
tcagacgtgaccagtgcaatcgaggcccagaacacacaggtgtctgccggccagttggga
gctgcaccacagcgtaagggtcagcagctgaacgcgaccgtgaccgcgaaaagtcgccta
cagacgcccgaggaatttgagaacatcatcctcaagagccagacggacgggtcactggtc
caaatgagcgatgtggcgaccgttgaactgggtgcggaaagctacaccacaacaacgaaa
tacaacgggaagcccgctagcggcatcggtgttaacctggctacgggcgccaacgccatc
gacaccgcaaacggtgtcaagtctgccatcgaggcgatgaagcccaccatgccgcagaac
gttgacgtcgtttatccctacgacacgacgccattcgttgagctatcgatccaggatgtc
atcaagacgctcggcgaagccatcgttctcgtcttcgtcgtcatgttcatctttctccag
agcttccgtgcgacgatcatccccactctagccgtgccggtcgttcttctcggcacgttc
ggcatcctgtccctgttcggatattcgatcaacacattgacgatgttcgccatggtgctg
gccatcggcctgcttgtggatgacgctatcgtcgtggtcgaaaatgtcgagcgcgtcatg
gaagaagaaggccttgatcccaaagccgccacgatcaagtccatgaaggagatttcgagc
gctttgatcggcatcgcaaccgttctgtcagccgttttcataccaatggcattcttctcc
ggatcggtcggtatcatataccgccagttctcggtgacgatcgtttcggcgatggttctt
tccgtcggagtggctttgatttttacgcccgcgctctgcgccaccctgctttgcccgccc
aaacatgaggcgaaaaacaaagggctattcggctggtttaaccgtggcttcgagaggaca
agcagcgcctaccagaaaagcatcggcggcatcgtgcgccgcagcccggtgttcctggtt
atattcgtcgctatggtcgcagtggctgcctacacgtttaccaggatggagtcctccttc
attcctgatgaggaccagggcgtattgatcgccagcgtccagcttccgcccggcgccacc
gaagatcgtacacgcaagatgcttgacgatgtcacgaactacttcctgaatgacgagaag
gaatatgtcgagggcgtcatgtcgtcggtcggcttcagcttcggtggcgcaggtcagaac
gtcggcatcgctttcatcagcctcaaagacttcgagggccgcacagacgaaaacgccaag
gccggggcaatcgctggccgcgcgatgggagcattttcgaagttcagcgatggcagcgcc
ttcgcccttcagccgcctgccattcccggctttggcacatctggtggattttcgttctat
ctgatggacagcaacagtgccggacatgctgccttgattgatgtgcgcaatcagttgttg
gccgcggcgggcaaggacacgcaacttgtcggcaccagaccgaatggtcaagaggatacg
ccacagtactcaatccagatcgatgaccggaaagccagcgcgcttggcctgcagatttcg
gacatcaacaacacgctgtcgaccgcgtggggcggctcctacgtcaacgacttcatcgat
cgcgggcgcgtcaaacctgtctacgtgcagagcgcgacggacttccgtatgcagcccgaa
gaccttggccgttggtacgcaaagaattcgagtgacacgatggtgcctttctcgtccttc
gcaacgggcaaatggacctacggttccccgcgcctcgaacgcttcaatggcgtctcagcc
gttgaaatccagggatcggctgcgccgggcgtcagttcaggcacggcgatgaccgcaatc
gacgacttgatgcaggagctgcccgcaggctatcagcatgaatggacgggtttgtccgct
caggagcgcctgtcgggcaatcaggcccttcaactctacgccatctcggtactcgtcgtt
ttcctggcgcttgcggcgctttacgaaagcctgactatccccttcgcagtccttctttca
gtcccaatcggcatattcggcgctgttgtggccgcaacgctgttcggccagacgaatgat
gtctatttcaaggttggacttctcacgacaatcggccttgcggccaagaatgcgatcttg
atcgtcgagtttgcaattgagcaacaggcccacggcaagagcttgattgaagccacactt
gaagcatcccgccagcggctgcgtccgatcctgatgacgtctttcgcgttcatccttggc
gtgttgccgcttgccgtcgcggatggtgcgggctcaggcgctcaaaactcgatcggtatc
ggtgtcatgggtggcatgatttcagccaccgtacttggtgttttcttcattccgctgctg
ttcgtcaccgtacgccggattttcaggtcaaggtcaaggaacaccgccgcagcaaccgtc
gccccgacagagtaa
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