Schizosaccharomyces osmophilus (fission yeast): SOMG_03960
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Entry
SOMG_03960 CDS
T09274
Symbol
cbf5
Name
(RefSeq) pseudouridine synthase Cbf5
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SOMG_03960 (cbf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
som03009
]
SOMG_03960 (cbf5)
03032 DNA replication proteins [BR:
som03032
]
SOMG_03960 (cbf5)
Ribosome biogenesis [BR:
som03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
SOMG_03960 (cbf5)
Prokaryotic type
SOMG_03960 (cbf5)
DNA replication proteins [BR:
som03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
SOMG_03960 (cbf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
UPF0113
Motif
Other DBs
NCBI-GeneID:
80877436
NCBI-ProteinID:
XP_056038435
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All DBs
Position
2:3227583..3229037
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AA seq
484 aa
AA seq
DB search
MAESKSETEFKIQPEAISASKINTEEWPLLLKNFDKLLVRTGHYTPIPCGSNPLKRPIAD
YVSSGVMNLDKPANPSSHEVVAWVKKILRVEKTGHSGTLDPKVTGCLIICNDRATRLVKS
QQSAGKEYVCILRLHDAIENERKLASSIETLTGALFQRPPLISAVKRQLRIRSIYESKLV
EFDEDRNLAIFWASCEAGTYMRTLCVHLGLLLGVGAHMQELRRVRSGCLSENDDIITMHD
ILDAQWVYDNTRDESYLRRVIRPLESLLVGYKRVVVKDSAVNAVCYGAKLMIPGLLRYES
GIEVNEEVVLMTTKGEAIAVGIAQMSTVELSTCDHGVVAKVKRCIMERDLYPRRWGLGPQ
SMKKKSMKKDGKLDKFGRPNENTPSEWSKSYIDYNDPNAPAATAVAAPTPVPEAVPEHAP
AVEADAEKKDESSKKRKSESEDDDAAKKEEKRRKKEEKKEKKEKKEDKKEKKEKKDKKEK
KKSE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatcgaaatcagagactgaatttaagatccagcccgaagccatttcggctagc
aaaatcaacactgaagaatggcctttgctgttgaaaaactttgacaagcttcttgtccgt
actggccattatactcctatcccttgtggtagcaaccctttaaagcgcccaattgctgac
tatgtctcctctggtgtgatgaatctggacaagccagcaaatccatcttctcacgaagtt
gtcgcctgggtgaaaaaaattcttcgtgtcgagaagactggccacagtggtactttggat
cccaaggtcactggttgcttgattatttgcaatgaccgcgccactcgtcttgtaaaatcc
caacaaagcgctggtaaggagtacgtctgtattttgcgtcttcacgatgctatcgagaac
gagcgcaagcttgcttcctctatcgagaccctcaccggtgccttgttccagcgtcctcct
ttaatttccgctgttaagcgtcaattgcgtatccgtagcatttacgaatccaagttggtt
gaatttgacgaagatagaaatcttgccatcttttgggccagctgtgaagctggtacgtac
atgcgtaccctttgtgttcaccttggtcttttgcttggtgttggtgctcatatgcaagaa
cttcgtcgtgtccgttctggttgtttgtctgaaaacgacgacatcattaccatgcacgat
atcttagatgcccaatgggtttatgacaacactcgtgatgaatcttacttgcgtcgtgtc
attcgccccttggagtctctccttgttggctataagcgtgttgtcgttaaagacagtgct
gtgaacgctgtttgctacggtgccaagttgatgattcctggccttctccgctatgagtct
ggcatcgaagtaaacgaggaagttgtccttatgaccactaagggtgaagctattgctgtc
ggtattgctcaaatgtctactgttgagctttcgacttgcgaccatggcgttgttgccaag
gtgaagcgttgcatcatggaacgtgatctttatcccagacgttggggtcttggtcctcaa
agcatgaagaagaagagtatgaagaaggatggtaagcttgacaagtttggccgtcccaac
gaaaataccccttccgaatggtccaagagctacattgactacaacgaccctaatgctcct
gctgctactgcagtggctgccccaactccagttcccgaggctgttcctgagcatgctcct
gccgttgaagctgatgccgagaagaaggacgagtcttctaagaagcgcaagtctgaatct
gaagacgatgacgctgccaagaaggaggaaaaaagacggaagaaggaagaaaagaaggaa
aagaaggaaaagaaagaagacaagaaagagaagaaggagaagaaagacaaaaaggaaaag
aaaaagtcagagtaa
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