Schizosaccharomyces osmophilus (fission yeast): SOMG_04317
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Entry
SOMG_04317 CDS
T09274
Symbol
sec231
Name
(RefSeq) COPII cargo receptor subunit Sec23a
KO
K14006
protein transport protein SEC23
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SOMG_04317 (sec231)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
som04131
]
SOMG_04317 (sec231)
Membrane trafficking [BR:
som04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
SOMG_04317 (sec231)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
80877793
NCBI-ProteinID:
XP_056039466
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Position
3:join(577628..577658,577710..577881,577941..577972,578067..580120)
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AA seq
762 aa
AA seq
DB search
MNFEEIEERDGIRFTWNAFPSTRIESSRTIVPISALYKPLNPRPDLPPVLYEPVTCKAPC
KAILNPFCHLDTRAKFWICPFCLQRNMLPPQYKDVSSTSLPLELLPEFSTIEYTLPRPPQ
LPPVFLFVVDLCQDQENLQSLKDSLIISLSLLPPECLVGLITFGTMVDVYELGYTECSKS
YVFRGSKDYSSKQVQEMLGLPVSSAAAAAPIALQQARAVSGGITASRFLLPIQQCEFQLT
SILEQLQPDSWPVANDRRPQRCTGTALNIAVSMMESSCNNSGGRIMVFAGGPSTVGPGMV
VSTELREPIRSHHDVERDQAKHMKKALRFYENLSKRVSANGHVVDILAGCLDQIGMMEMR
SLSASTGGYLVLSDSFTTSIFKQSFQRIFSRDAFGHLALGFNGSMEVVTSKELKISGLIG
NAVSLNKKAQNVGDTEIGLGNTNSWKMCGLSPKSAFALYFEVATQTAAAPQSNDKGLIQF
LTLYQHSSNTFRLRVTTSARAFADGGSPLIINSFDQETAAVAMARIAAFKAEVDDGPDVL
RWTDRMLIKLCQKFAEYRKDDPASFRLSSQFTLYPQFMYYLRRSPFLQIFNNSPDETAFY
RHMLNIEDVNNALIMIQPTLLSFSLEHPDGKPVLLDAVSVKSDAILLLDTFFHILIFHGD
TIAQWRNAGYHEKPEYANLKELLQGPRVEAAELLVDRFPIPRFIVCDQGGSQGRFLLSRI
NPSETHNSATIYGAPSAHAVLTDDVSLQVFMSHLKKLAVAVS
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgaggaaattgaagagcgagatgggatccgttttacttggaatgcgtttcca
tcaactagaattgaaagctctaggacaatcgtcccaatttctgctctctacaagccttta
aaccctagacctgacttaccgccagtcctttatgaaccggtgacttgtaaagctccatgc
aaagcaattttgaatcctttttgccaccttgacactcgtgctaaattttggatatgtcca
ttttgcttgcaaagaaacatgctgccaccgcaatacaaggacgtatcaagcactagcctt
cctttggagttacttcctgaattctctaccattgagtatactcttcccagaccaccacaa
ctcccccctgtgttcctttttgttgtggatttatgtcaggatcaagaaaatttgcaatca
ttgaaggattcccttattattagcttgagcttgcttcctcccgagtgtttggttggttta
attacctttggtactatggtcgatgtttatgagcttggatacaccgaatgttccaaatca
tatgtcttccgcggatcaaaggattatagttctaaacaggtgcaagagatgttgggattg
cctgttagttctgctgctgctgctgcgccaattgctttacaacaagctcgcgccgtttct
ggcggtataaccgcctctcgtttccttttaccaattcagcaatgcgagtttcagttaact
agcattctcgaacagcttcaacctgactcatggcctgttgctaatgataggcgccctcag
cgttgcacaggaactgctcttaacattgccgttagcatgatggaaagtagctgtaataat
agtggtggccgcattatggtttttgctggcggtcccagtactgttgggcctggtatggtt
gtttccactgagctccgtgaacctatccgttctcaccacgacgttgagcgtgatcaagct
aagcatatgaagaaagctttgcgtttttatgaaaaccttagtaaacgagttagtgccaat
ggtcacgttgtcgacattttagctggctgcttggatcaaattggtatgatggaaatgaga
agcttatctgctagtactggaggttatttggtactttctgattcctttacgacatctatc
tttaaacaaagtttccaacgtatattttcccgcgatgcttttggacacctagctttaggc
ttcaatggcagtatggaggtggttacaagcaaagaattgaagatatccggcctgattgga
aatgccgtctcgttgaacaagaaagcccaaaatgtcggtgataccgaaattggtcttggt
aatacgaacagttggaagatgtgtggtctatctcctaagtctgcttttgctctctatttt
gaagttgctacgcaaaccgctgctgcacctcaaagtaatgataagggcttaattcaattt
ctcaccctataccaacattcctctaacactttccgtttgcgtgttactacttcggcccgt
gctttcgctgacggtggaagcccattaatcattaattcctttgaccaggaaaccgctgct
gtagctatggcacgaattgctgctttcaaggccgaagttgacgatggaccggacgttctt
cgctggactgatcgaatgctaattaaactttgccagaaatttgctgagtatagaaaggat
gatcccgctagcttccgtctctcctctcaatttactctttatcctcaatttatgtactat
cttcgacgtagcccttttcttcaaattttcaacaactcaccggatgaaactgccttctac
cgtcatatgttgaacattgaagatgttaacaatgctttgattatgattcagcccacttta
ctttcgttttctctagaacatcctgatggtaagccagtgttattagatgcagtttctgta
aagtctgatgcaattcttttacttgataccttcttccatattcttattttccacggtgat
acgattgcccagtggagaaacgctggttatcatgagaaacctgaatatgcaaaccttaaa
gaattactgcaaggtcctagagttgaggctgccgaattactagttgacaggttcccgatt
cccagatttattgtatgcgatcaaggtggtagtcaaggacgtttcttgctttcacgcatt
aacccatcagaaacccacaactctgccactatttatggtgctccttccgctcatgcagtt
ttaaccgacgacgtatcattacaagtatttatgagccatcttaagaagcttgctgttgct
gtttcttga
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