Schizosaccharomyces osmophilus (fission yeast): SOMG_04541
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Entry
SOMG_04541 CDS
T09274
Symbol
tho1
Name
(RefSeq) THO complex subunit Tho1
KO
K12878
THO complex subunit 1
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03013
Nucleocytoplasmic transport
som03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SOMG_04541 (tho1)
09122 Translation
03013 Nucleocytoplasmic transport
SOMG_04541 (tho1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_04541 (tho1)
03041 Spliceosome [BR:
som03041
]
SOMG_04541 (tho1)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
SOMG_04541 (tho1)
Spliceosome [BR:
som03041
]
Complex C
Other components
EJC/TREX
SOMG_04541 (tho1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
SOMG_04541 (tho1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
80878013
NCBI-ProteinID:
XP_056039187
LinkDB
All DBs
Position
3:complement(join(1073796..1074854,1074905..1075795,1075855..1076058))
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AA seq
717 aa
AA seq
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MGMDVKHSLIKKFTDIYSIKNIPSFEEQPLDTNFKEFVNSEIWSKITSEFYNSLEFETAI
RFRCYEIRSENQNFEENVKELFLILDLLVVLNEIDASYCDAIFPFLIIEELMDIHRLKEC
RKLYEYFETRSVLLDGLVSNRGRGPVLLRISNELLRRLSGQVDPALCGRIHILLSKAFAP
EERSGSNFRGDFNLENPVISTKISSPNIPASDGNEASYSQKVLNIYEVFWNLQDLLVQPP
KIAQDAGNMQKFLDSANAILESFEAIQKNTFFLDNPKPTIDPTSSALLPEKYTVINDNLC
PNYIRSLPLFDFQLIDETFRLHFLLQAIILCDFLLDYSKERVDSRRTRPFTNKAVAPNAS
LSDEDEKNVSALLNRIYALLREVKNGDYVETITSVVNVENNWKSWKGYGCLSFEKPLLDK
SVLDEAAAGLKKVASTPPKIRYAMGNAPLTKIWQNAGENSLEDLKKEERYRIPTPQSFFP
GVKHDSAEMEDSVKEDEQEYYRQAKASKTWLAFRSAINSHLEAFEYAGLGELELLTQAIE
GNATLEKPTTNINPAFDINIVEEGDEMLREKVIKEGKKQEAQEATPMDEDKGSEGKGQQL
VEPATTKEEAKKPSDQEDVPTHSHRENGKENTGNENDDKKDIADDKSKSASEEESIKENV
PSIETSTTTPKEETKEVQNVESSESKKRSREEGDKNEENTSSSPKRQKTEDKVGADN
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgggaatggatgtcaaacattccttgattaagaagtttacagatatttactcaattaag
aatattccaagctttgaagagcaaccattagataccaactttaaggaattcgtgaatagt
gaaatatggtcgaaaatcacttctgagttttataactctcttgaatttgaaactgccatt
cgttttcgctgttatgaaattagatctgaaaatcaaaattttgaagagaacgttaaggag
ctattcttaatcctagatttgttggttgttttgaatgaaattgacgcttcttactgtgat
gcaatcttcccgtttttaatcattgaagaactgatggacattcatagattaaaggagtgc
cgaaaactgtatgaatattttgagacaagatcggttcttttggatggattagtcagtaat
cgtggacggggacctgttttactgcgtatttcaaacgagttattgcgtcggctttcggga
caagttgatcctgctctatgtggacgcattcatattttactcagtaaagctttcgcaccc
gaagaaaggagtggctctaattttcgtggtgactttaatctggaaaatccagtcatcagt
accaaaatttcatcacctaatatccctgcgtcggatggaaatgaagcttcttactcacag
aaagtgctcaatatatatgaggtgttttggaatttacaagatctgctcgtccaaccacca
aaaattgcacaggacgctggtaatatgcaaaagtttttggattccgcaaatgctatttta
gagtcatttgaggctattcaaaaaaacacattctttttggacaatccaaagcctacgata
gaccctacgtccagtgctttgcttccggaaaaatatacagttattaacgataatttatgc
ccgaattacattcgttcccttcctctttttgactttcaattgatagatgaaacgttccgt
ctccactttttgctccaagctattattttgtgtgattttcttttagattattcaaaagaa
cgagtagattcgcgtcgaactcgacctttcacaaataaagctgtagcacctaatgcaagc
ttatctgatgaagacgaaaagaatgtttcagcgttactcaatcggatttatgcactttta
agagaagtaaagaacggtgattacgtcgaaacaattacatcggttgttaacgtggaaaat
aattggaaaagttggaaaggatatggatgtctgtcatttgagaagcctttgctcgataag
tctgttctggacgaagctgctgcaggtttaaaaaaggttgcaagtactcctcctaaaatc
cgttatgccatgggtaatgctccgcttaccaaaatatggcaaaatgctggagagaattct
ttagaagacttgaaaaaagaagaaagatatcgaatacctactcctcaaagctttttccct
ggtgtaaagcatgattctgccgaaatggaagattcggtaaaggaagatgagcaagaatat
tatcgacaagcaaaggcttcaaaaacctggctcgcatttcgttctgcaatcaattcgcat
ctagaggcttttgaatatgctggattgggtgaattagagctattaacacaagctattgaa
ggtaatgcgacattggaaaagccgacaacaaatattaatcctgcatttgacattaatatc
gtcgaggaaggtgatgaaatgttacgtgaaaaggtgataaaagaagggaaaaaacaggag
gcccaagaagctacgccgatggacgaagacaaaggatcagaaggcaaaggacagcagcta
gttgagcctgcaactacaaaggaagaagcaaaaaagccgagtgatcaagaggatgtacct
acacactcccatagggaaaatgggaaagaaaatactggaaatgaaaacgatgacaaaaaa
gatattgccgacgacaaatcaaaatcagcatcggaagaggaatccattaaagaaaatgtt
ccctccattgaaacttctacaacaacacctaaggaagaaacgaaggaagtccagaatgtc
gaaagttcagagagtaagaagcgatcccgagaagagggggataaaaatgaagaaaatact
agttcaagtccaaagcgtcaaaaaacggaagataaagttggcgcggataactaa
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