Schizosaccharomyces osmophilus (fission yeast): SOMG_04772
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Entry
SOMG_04772 CDS
T09274
Symbol
pmd1
Name
(RefSeq) leptomycin transmembrane transporter Pmd1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
som00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SOMG_04772 (pmd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
som02000
]
SOMG_04772 (pmd1)
04147 Exosome [BR:
som04147
]
SOMG_04772 (pmd1)
04090 CD molecules [BR:
som04090
]
SOMG_04772 (pmd1)
Enzymes [BR:
som01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SOMG_04772 (pmd1)
Transporters [BR:
som02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SOMG_04772 (pmd1)
Exosome [BR:
som04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SOMG_04772 (pmd1)
CD molecules [BR:
som04090
]
Proteins
SOMG_04772 (pmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_21
AAA_29
RsgA_GTPase
Zeta_toxin
nSTAND1
AAA_16
AAA_25
DPM3
DUF3201
Motif
Other DBs
NCBI-GeneID:
80878239
NCBI-ProteinID:
XP_056039385
LinkDB
All DBs
Position
3:complement(1629936..1633970)
Genome browser
AA seq
1344 aa
AA seq
DB search
MSFSRNSESNKFNIEKDNESILVDKFSTSSVENSEKIVDVVKDPFQQYTPKEREILYRQV
NDTKAKVAGYMRIVTCGDKWDYLLQLAGCITAIGAGLGMPLMSVVAGKLAKAFTDLASGR
GAETFQHDVNHFVLYFIYIAIGVFGCSYTFTVTFIISGERISRRIRQQYLHAVLSQNIGY
FDRLGAGEITTRITSDTDYIQDGLGEKVGLVLFALATFLSGFVIAFIRHWKFTLIISSML
LAILGGITCGVKFITQFTKAQIAQLSSSSTFVEEVLSNIRNTFAFGTQNLLSDSYTKFLN
PAKVNGVKKSMVKGIMMGWMFFVGYGAYGLAFWEGGRLLHSGEINVDKMINCFFAVLIAS
YSLANIAPRMQAFVNCSSAAKKIFDTIDRASPIDAFSPTGKTIQHLNGEIELKNIKFVYP
TRPEVVVLNNFSLLCPAGRITALVGASGSGKSTIVGLVERFYDPIAGQVMVDGEDLRDLN
VASLRAHISLVQQEPVLFGATVFDNIAYGLTDDMQSTLTEDELRERVYDAAKTANAYDFI
MTLTEQFDTNVGQRGFLMSGGQKQRIAIARAIISDPKILLLDEATSALDSKSEVIVQKAL
DNASRSRTTIVIAHRLSTIRNADNIVVVNNGKIVEQGKHSDLLVFNGAYAKLVEVQQLAE
TNNDDAVIEPGEEEVDEIVHTTTQGEDDSSSTRNSFYEKEKDAISLRDTPLGHLPFDPVP
DLPNKTMDALDDETPSVELDSSSQLESNATDISSWRAMVFIHSFVEGTLEFLYLMIGILA
SMVCGAAYPVQAVVYARFLNIFTDLNSPNYFHKINVFGVYWLILAIAELFGYSLSQYSLS
YVLECLQQRIRWHLFRTLLRQDIEFFDRAENTVGALTTSLSTSIQNLEGLSGFYLGTFVQ
IFTNIISVSILSLATGWKLALVTLATSPVMIMAGYYRVAALNRIQSKLSTAYKSSAAYAC
ESTSAIRTVASLTRESNVYEIYCTSLVQPGRETAVSSLISGLFFSASQAVTFLVNALAFW
YGATLMRRGEYNLAQFYTCFIAIVFGIQQAGQFLGFAGDFTKAKSSAGSIKHLCDSRPKI
DTWSEEGRKIESLEDSSIVFEDVTFRYPTRKHIQVLRGLNLTVKPGQFVAFVGASGCGKS
TTIGLIERFYDCESGSVKVGGVDIRDYNINDYRKQIALVSQEPTLYQGSIRENILLGASR
KVKEEELIGCCKMANIHDFIMGLPNGYETLSGQKGSSLSGGQKQRIAIARALIRNPKILL
LDEATSALDSHSEKVVQEALNKASEGRTTVAIAHRLSTIQNADCIFVFDGGVIAEAGTHN
ELVNQGGRYHELVVEQGLGADETK
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttttcaagaaattcggagtcgaacaaatttaatattgaaaaagataatgagagc
atacttgtcgataagttttccacgagtagcgttgagaattcagaaaaaattgtcgatgtt
gtaaaagatccttttcaacagtatactccaaaagagcgcgagatcttgtatcgtcaggtg
aatgataccaaggcgaaagtagcagggtatatgcgaattgttacatgcggtgataaatgg
gattatttgcttcagttggctggctgtatcaccgctattggtgctggacttggtatgccc
ttgatgtccgttgtcgctggtaaattagccaaagcttttaccgatcttgcaagcggtcgt
ggtgctgagaccttccaacacgacgttaaccattttgtactgtattttatttatattgcc
atcggtgtttttgggtgttcttatacctttacagtcacatttatcatatctggtgaacgg
atttctcgtcgcattcgccaacaatatctgcatgccgtcctcagtcaaaacatcggttac
tttgatcgtcttggtgcaggcgaaataaccacgcgtattactagtgacacagattacatt
caagatggtttgggcgaaaaggttggtttggtgctttttgctcttgctacgtttctgtct
ggattcgtcattgctttcattcggcattggaagttcacccttattatcagttccatgctg
ttggcgattcttggtggcattacttgcggtgttaaatttataacacagtttacgaaagcc
cagattgcccagctatccagttctagtacttttgttgaagaggttttatccaatatacgt
aatacatttgcatttggtacccagaacttactatccgactcttatacaaagtttttgaac
cctgccaaagtcaatggcgtcaagaaatccatggttaagggtatcatgatgggatggatg
ttttttgttggttatggtgcttatggtcttgctttctgggaaggtggccgtcttttgcat
tctggagaaataaatgtcgacaaaatgattaattgtttctttgctgtcctaattgcgtct
tatagtttggcaaatatcgctccaagaatgcaagcgtttgtaaattgctcgtcagctgcc
aaaaagatttttgacacgatcgaccgagcgagtccaattgacgccttctcgcccactggt
aaaaccattcaacatcttaatggagaaatagaattgaagaatataaagttcgtataccct
accagacctgaagttgtggttttaaacaacttttctttgctgtgcccagctggtagaatc
actgcacttgtcggtgcgagtggtagtggaaagtccactatagtaggtcttgtcgagcga
ttctatgatcctattgcaggacaggttatggtggatggtgaagatcttcgtgatttaaac
gttgcttctttacgcgctcatatctctctagtgcagcaagagccagttctgtttggagct
accgtttttgataacattgcttatggattgactgacgatatgcaatcaacacttaccgag
gatgaactgcgagagcgcgtttacgatgctgccaagaccgcaaatgcttatgattttata
atgactttgaccgaacaatttgataccaatgtaggccagcgcggctttttaatgtcgggt
ggacaaaagcaaagaattgcaattgccagagctattattagtgatcctaaaattttactt
ttggatgaagcgacaagtgctttagattcaaaaagcgaagttattgttcaaaaggctcta
gacaatgcttctagatctcgcacaacaattgtcattgctcatcgtttatcaacaatccgc
aatgccgataacatcgtagtagtcaataatggaaagattgttgaacagggaaagcactct
gatttattggtttttaatggagcttatgccaaattagttgaagtgcagcaactcgctgaa
acgaataacgatgatgctgtcattgaaccgggagaagaggaagttgacgaaattgttcat
acgactacacaaggtgaagatgatagctcttcgactcgcaattcattttatgaaaaagaa
aaagacgcaatctcgcttcgcgatactccacttggtcacttgccattcgatcccgttccg
gatttgccaaataaaactatggacgccctggatgacgaaactccgagtgtagaacttgac
tcttcttcgcagcttgagagtaacgcaactgacatcagctcctggagagcaatggttttt
attcattcttttgttgaaggtactttagaatttttgtaccttatgatcggtatcttagca
tccatggtttgtggtgccgcgtaccccgtacaagcagtggtgtatgccaggtttttgaat
atctttacagatttgaactcgccgaattactttcataaaattaatgtatttggagtttac
tggttgattcttgctattgcagaattattcggttattctttaagtcaatattctttgtct
tatgtgctggagtgtcttcaacaacgtattcgctggcatctcttccgtaccctccttcgt
caggatatcgaattctttgaccgtgctgagaatacagtaggtgctttgactacttcactt
tcaacctccattcagaacctagagggcctgtcaggattttatcttggaacatttgtgcaa
atttttacaaatataatttctgtttcaattctttcactggccactggatggaagctggct
ttggttacattagctacttcccctgtcatgattatggctggttattatcgggttgctgca
ttgaatcgtattcagagtaagttgtcaactgcgtacaaatcgtctgctgcatatgcttgc
gaatctacatcagccattagaacagttgccagtctcaccagagaatcaaacgtatatgaa
atttactgtacatcgttggttcaacctggtagagaaacagctgtatcttccctaatatct
ggtttgttcttttctgcgtcgcaagcagttacatttttggtcaatgcgctggcattttgg
tatggtgctacactgatgagaagaggtgaatataatttagcccaattttatacttgcttt
atagctattgtcttcggtatccagcaagctggacaatttttgggctttgcaggtgacttt
acgaaagcaaaatcgagcgctggatcaattaaacatttgtgtgatagtagaccaaaaatt
gatacctggtctgaagaaggacgcaaaattgaatctttggaagattcctccattgtattt
gaagatgtaacattccggtaccctacgagaaagcacatccaggtacttcgtggtctcaac
ttgacggttaaacctggtcaatttgttgctttcgtgggtgcttcaggatgcggtaagtca
acaacgattggcttaattgaacgcttttatgactgcgaaagtggatctgtaaaagttgga
ggtgtcgatatccgtgactacaacattaatgactaccgcaagcaaatagctctcgtgtcg
caagagccaaccttataccagggaagtattcgagagaatatccttcttggtgcttcaaga
aaagtaaaggaagaagaacttattggatgctgtaagatggctaatattcatgattttatc
atgggtttgcctaacggttatgaaacgctttcgggacagaaagggtcatctctgtctggt
ggacagaaacagagaatcgctattgctcgtgccttgattcgaaatcctaaaattttactg
ttagatgaggcaaccagtgctttggacagtcatagtgaaaaggtggtacaagaagcttta
aacaaagcttcagaaggacgtaccactgtagcaattgctcatcgcttatcaacaattcag
aatgctgactgtatctttgtatttgatggaggcgtaattgctgaagctggtacacacaat
gaacttgtgaaccaaggcggtcgttatcatgaactcgtggtcgaacaaggtcttggagca
gatgaaacaaagtaa
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