Shewanella oneidensis: SO_0016
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Entry
SO_0016 CDS
T00099
Symbol
tag
Name
(GenBank) DNA-3-methyladenine glycosylase I Tag
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
son
Shewanella oneidensis
Pathway
son03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
son00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SO_0016 (tag)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
son03400
]
SO_0016 (tag)
Enzymes [BR:
son01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
SO_0016 (tag)
DNA repair and recombination proteins [BR:
son03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SO_0016 (tag)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-ProteinID:
AAN53103
UniProt:
Q8EKS4
LinkDB
All DBs
Position
18279..18854
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AA seq
191 aa
AA seq
DB search
MEEIRCNWVSDDPLYRDYHDNVWGRPVYDPKELFAKLCLDGQQAGLSWITILKKQQNYEQ
AFADFEPAVIATFDDAKVEELMANPGIVRNRLKIHSIIRNAKGYLAYTADGEDFSAFLWS
FVGGKPRVNQFTSMSQIPAQTPESEAMSKALKKLGFNFVGPTICYAFMQAVGMVNDHLVD
CVAYDACCGGK
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatccgctgtaattgggttagtgatgatcccttgtatcgcgattatcacgat
aatgtatgggggcgcccagtttatgatcccaaggagttatttgccaagctctgcttagat
ggccagcaagcggggttatcttggattacgatcttaaagaaacaacaaaattatgagcaa
gcttttgccgattttgagcctgcagtgattgctactttcgatgatgctaaagttgaggag
ttgatggccaatcctggtattgtgcgcaatcgactcaagatccattcaattattcgtaat
gcaaaagggtatttagcatatacggccgatggtgaggatttttctgcgtttctgtggagt
tttgttggcggtaaaccgcgagtgaatcaatttacgtctatgtcacagatccctgcgcaa
acgccggaatcagaggccatgtcaaaggcgttaaaaaaacttggctttaactttgttggc
ccgacgatttgttatgcctttatgcaggcagtgggtatggtgaatgatcaccttgttgat
tgcgttgcttatgatgcttgctgtggcggtaaataa
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