Shewanella oneidensis: SO_3160
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Entry
SO_3160 CDS
T00099
Symbol
rfbc
Name
(GenBank) dTDP-4-keto-L-rhamnose-35-epimerase RfbC
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
son
Shewanella oneidensis
Pathway
son00521
Streptomycin biosynthesis
son00523
Polyketide sugar unit biosynthesis
son00541
O-Antigen nucleotide sugar biosynthesis
son01100
Metabolic pathways
son01110
Biosynthesis of secondary metabolites
son01250
Biosynthesis of nucleotide sugars
Module
son_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SO_3160 (rfbc)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SO_3160 (rfbc)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SO_3160 (rfbc)
Enzymes [BR:
son01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SO_3160 (rfbc)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AAN56160
UniProt:
Q8ECI2
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Position
complement(3297552..3298091)
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AA seq
179 aa
AA seq
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MKCIETELAEVLIFEPKVFGDERGFFMETFRQAYFTECLLSRGFEAPALVQDNYSRSQQH
VLRGLHYQLRHPQGKLVRVCAGSIFDVAVDIRPQSATYGKWVGRILSADNHLQMWIPPGF
AHGFYVLSEYADVLYRCSDYYAPNDEYVLPWNSVQFAIDWPLLNETPILSARDANAVSA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcattgaaaccgagctggctgaagtacttatctttgaacctaaggtatttggc
gatgagcgtggtttttttatggaaacctttcggcaagcgtattttactgagtgcttgctg
agtcgcggatttgaagcccctgcgttagtacaagataactacagtcgctcgcagcagcat
gtgttgcgtggattgcattatcaactccggcatccgcagggcaaattggtccgcgtatgt
gccggcagtatttttgatgttgccgtcgatattcggccgcaatctgcgacctatggaaaa
tgggttggcaggattctttctgctgataaccatttacaaatgtggatcccgccaggattt
gcccatgggttttatgtgttgagtgaatacgctgatgtgctgtatcgctgcagcgattat
tatgcgccgaatgatgaatatgtgttgccttggaatagtgtgcagtttgcaattgactgg
ccgctgttaaatgaaacacccattctttccgcaagggatgcaaacgccgttagcgcctaa
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