Spirosoma oryzicola: LQ777_07110
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Entry
LQ777_07110 CDS
T08981
Name
(GenBank) Ig-like domain-containing protein
Organism
soq
Spirosoma oryzicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_7
Cellulase
Y_Y_Y
Big_13
fn3_3
Big_3_3
Big_3_5
Por_Secre_tail
InlK_D3
PKD
DUF3324
PKD_4
DUF4175
FlgD_ig
ComP_DUS
Motif
Other DBs
NCBI-ProteinID:
UHG92665
LinkDB
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Position
complement(1752531..1755752)
Genome browser
AA seq
1073 aa
AA seq
DB search
MKICTFLIFGLLLSSLLAVAQSPTPLAANGQLKVVGTQLTNEAGKAIQLRGVSTHGLQWF
PQCYTQSSVQAVAKDWGADVLRIAMYVDEGGYLSGKEAMRTKVNQIVDWAEQSGIYCIID
WHILNPGDPNVHTADAIEFFTIMSQRNAGKKHVIYEICNEPNGVSWSQIKSYAEQVIPAI
RKNAPNAVVLVGTPNWDQRPQDVIGNELSYPNLLYTVHFYAASHFFQNDVRSITNKLPVF
FSEWGTSTYSGGGSLDFNNGQAWLDLMAGNNPGNQKISWCNWTYSDAGESSAALNSGACN
GQQWNNTSPSGTWVKDRILNPADDFGPATPSVAITSPANNTTVTIGSNLVVNASVYNASA
TAVEFYNGTMLLGSDATAPYSWTIVSVPQGTYSLTAKALISNGNLTSSVVQVTAAPAPNQ
VPIVSLTSPTNNTAFPLPATISIAANATDNDGSVSKVEFYNGSTKLGEDATAPYTFTWTG
MTAGTYTLTAKATDNQGAVTTSGAVTVLVYNQGDSDPTADLIGPNCVYPNTVQLFEVNAN
KLTNATTFSWWCTGSTKSITTAQAGKASIDFGPSFTGGQVCVGINYSAAPWYSQYCKTVT
VCPGTPTNQLPSVSLTSPTNGTTYTAPASITLTATASDTDGTVAKVEFYNGSTKLGESTS
APYRFTWTSVGAGNYALTAKATDNAGATTTSGTINIQVSNPTPTNQAPVVSLTSPANSAT
FTAPANVVLTASASDADGSITKVEFYNGTTKLGESSSAPYQFTWNAVGAGTYSVTAKATD
NAGAVATSAAITISVKAPANQSPTVTLTTPANSATFTAPATVALSANASDADGTITKVEF
YNGSTKLGETTSAPYQFAWNNVSAGTYTLTAKATDNLGATTTSASVTIQVNNATTPSPEA
DLIGADCARPNDVKVYEVNARNLPNATQFSWWFTGSSQSITATQAGKATYNFGPWFSGGQ
VCVGVNYSAAPWYKSFCKTITVCPAGARVGADEVADNPVFPNPAHDYFTFVAERDIHSMN
VVDQTGHEHLQLGSAKAGQTITFGEKLSPGVYLLRIRYEKQAERTLKLLKAGN
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttgtacgtttctaattttcggcctcctactttcgagtttgttggccgtagcc
cagtcaccaacgcctttggcggccaatgggcagcttaaagtggtaggcactcaactaacc
aacgaggccggaaaagccattcagcttcggggggtgagcacgcacgggttgcaatggttt
cctcagtgttacacccagagttcggtgcaggccgtagccaaggattggggagccgacgtg
ctgcgcattgccatgtacgtagacgaaggtggttacctgagcggcaaagaagcaatgcgt
accaaagtcaatcaaatcgttgactgggccgagcaaagcggcatctattgcatcatcgac
tggcacattctgaaccccggcgacccaaacgttcataccgccgatgccattgagtttttt
accatcatgtcgcagcgcaacgcggggaagaaacacgttatctacgaaatctgtaacgaa
ccgaacggtgttagctggtcgcagatcaaaagctacgcggagcaggtcattccagctatt
cgaaaaaacgcccccaacgccgtcgtattggtgggtacacccaactgggaccagcgaccg
caggatgtaatcggtaatgaactaagctatcctaacctgctgtacacggttcacttttac
gcagcctcgcatttttttcagaacgacgttcggtccattacgaacaaactacccgtcttt
ttcagtgagtggggcacatccacgtattcaggtggcggaagtctggatttcaacaacgga
caagcctggctcgatctgatggcgggtaacaatccgggcaatcagaaaattagctggtgt
aactggacctactcggatgcgggcgagtcatcggcggctctcaactcgggagcctgcaac
ggccagcagtggaacaacaccagtccgtcgggtacgtgggtgaaagatcgtatccttaac
cccgccgatgattttgggccggcgacgccatcggtagcaattaccagcccagccaacaac
acgaccgtaaccatcggctccaacctggttgtcaacgcttcggtgtataacgcttcggca
acggctgtggagttttacaacggcacaatgctgctaggctcggacgctacggcgccttac
tcgtggaccattgtcagcgttccgcaggggacatactcgttaacggccaaagccctgatc
agcaacggcaacctgacttcatcggtggtacaggttacagcggccccggctcccaaccag
gtacctattgtcagcctgacgtcaccaaccaacaatacggcctttccgctcccggcaacg
atttcgattgcggccaacgctaccgataatgatggtagcgtttcgaaagttgagttctat
aacggatcaaccaaactaggcgaagacgccaccgccccctacacgttcacctggacgggc
atgaccgccggaacctatacactcacggccaaagcgacggacaatcagggagccgtaacg
acttccggcgcggtgacggtgcttgtttacaaccagggcgattccgacccaacggccgat
ctgatcggacccaattgtgtgtaccccaacaccgttcagttgtttgaggtcaatgcaaac
aaactgaccaatgcaaccacattttcgtggtggtgcaccggatcgacgaaaagtattacg
acagcgcaggcgggcaaagccagcatcgatttcggtcccagtttcacgggtggtcaggtg
tgcgtcggtatcaactattcggcagctccctggtacagccagtattgcaaaaccgtcacc
gtttgtccgggaactccaacgaatcaattgcccagtgtgtcactaacttcgccaaccaac
ggtacgacctacacggctccggcatctattacgctgactgctaccgccagcgataccgac
ggaaccgtcgccaaagtcgagttttacaacggctcgaccaaattgggtgaaagtaccagc
gctccttaccgctttacctggacgagcgttggtgcaggcaactacgcactgaccgccaaa
gccaccgacaatgcgggtgcaacaactacttcgggcacaatcaacattcaggttagtaac
cctaccccgaccaatcaggctccggtggtatcgcttacgtcaccagccaacagcgccacg
ttcacggctccggctaacgttgttctgacagcttcggccagtgacgcggacggaagcatt
accaaggttgagttctacaacggcacaacgaaactaggcgaaagctcgtctgctccgtac
cagtttacgtggaatgcggttggtgctggtacgtacagtgtaacggctaaagcgacggat
aacgcgggggctgtagccacctcagcggctatcactatcagcgtaaaagcaccggctaac
cagtcgccaaccgtgacgctgacgactccggccaacagcgcaacctttacggctccggca
accgtggctctttcggcaaacgccagcgatgcggatggaaccatcaccaaggtcgagttt
tacaacggctcaaccaagttgggcgaaactaccagcgctccctaccaattcgcctggaat
aacgtaagtgcgggcacctatacgctgaccgccaaagccaccgacaacctgggggctaca
acgacttccgccagcgtaacgattcaggtaaacaacgcgacaacgccaagtcccgaagcg
gatctgatcggtgcggactgcgcccggcccaacgatgtaaaggtttatgaagtcaacgct
cgtaatctacccaacgcaacgcagttttcgtggtggtttacgggttccagccagagcatc
accgcaacgcaggcgggcaaggcgacgtataatttcggcccctggttttcgggtggtcag
gtttgcgtcggcgttaattattcggccgcgccctggtacaaatcgttttgcaagaccatt
acggtctgtccggcaggagcccgcgtgggtgccgatgaggtagccgacaaccctgtattt
ccgaatccggcacacgattactttacgtttgtggccgagcgagatattcattccatgaac
gtcgttgaccagaccggacacgaacacctgcaactcggatcagccaaagctggacaaacg
ataacgtttggcgaaaagctttcgccgggtgtttatctgctacgtattcgttacgagaag
caagccgaacgcacgctaaaattgctgaaagcgggcaattaa
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