Spirosoma oryzicola: LQ777_11405
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Entry
LQ777_11405 CDS
T08981
Name
(GenBank) AraC family transcriptional regulator
KO
K18954
AraC family transcriptional regulator, transcriptional activator of pobA
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soq03000
]
LQ777_11405
Transcription factors [BR:
soq03000
]
Prokaryotic type
Helix-turn-helix
AraC family
LQ777_11405
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
UHG93487
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Position
complement(2693449..2694318)
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AA seq
289 aa
AA seq
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MAKSVPVYKLASFPRHEPNAPFYMTRLEKLVQEFKRIGDSHSHTFYLMMWITHGSGTHTI
DFKTHEVKPFQLYFLTPGQVHSWQLSADIQGYDLFFEANFLRSRFGNRLHEYPFYHSHQH
QPLLNVTDQRKLVGDLFTHAWDEYDQHQANRSDVFLSYLHLMLETANRIYNQQWPGADTL
FYDHIRQYEDLLEHQFLTVREVNEYAAQMNLSPNYLNHICKSVLGKTASQLLYERLIVEA
QRLLTHTNQSVKEIAFRLGFEDPSYFVRFFKKHTRQTPAEFRQNASIHR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatctgtcccggtctataaactagcgtcatttccccgccacgaacctaacgca
ccgttttacatgacccggctggagaagctggtccaggaattcaaacggattggcgattcg
cattcgcacacgttttacctgatgatgtggatcacgcacggaagcggaactcataccatc
gacttcaagacccacgaagtcaaacctttccagctttattttctcacgccggggcaagtg
cacagttggcagttatcagccgatattcaaggctatgacctgttttttgaagctaatttc
ctgcgtagccgctttggcaaccgactgcacgagtaccctttttaccactcccaccaacat
cagccgctcctgaacgtaacggaccaacgaaagctggtgggtgatttgtttacgcatgcc
tgggacgagtatgaccagcatcaggcaaaccggtccgatgtgtttttgtcctatctgcat
ctgatgctagaaacggctaatcgaatttacaaccagcagtggccgggagccgatacattg
ttttatgaccacatccgtcaatacgaagatttgctggaacatcaatttctgacggttcgt
gaagtcaacgagtacgcagcccagatgaatttgtcgcctaattacctgaatcacatctgc
aaaagtgtacttggtaagacggccagccagttgttgtacgaacgcctgatcgttgaagct
caacgcttgttaacgcataccaatcaatcggtcaaggagattgctttccgattaggcttt
gaagacccttcctacttcgtccggtttttcaaaaaacacacgcggcaaacgcccgccgag
tttcgccaaaacgcatcgatccatcgttga
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