Spirosoma oryzicola: LQ777_13505
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Entry
LQ777_13505 CDS
T08981
Name
(GenBank) efflux RND transporter permease subunit
Organism
soq
Spirosoma oryzicola
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
UHG89260
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Position
3174035..3177121
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AA seq
1028 aa
AA seq
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MNPIKGSLHYPQVTLSVVFLAVAVGIYSLLTMPRREDPKITIRSGLVVAFYPGANSAQVE
DQVTRKIEQYLFGYAEVRKEKTYSTTRDGAVVINVELEESVKNPDIFWSKLRHDLNQAKV
LDLPQGVQGPIVNTDFGDTVALLIGIESDDLSYTELDQNLKQIEDGLRTIKAVSKIRRYG
EQKEQITITARSAQMVQYGIKWTQVVQVLQAQNAIKATGNVKTEDSQVPLYAQGYYNTEQ
EISNQVIGTSSTGAVVRLGDVATIKREYTEPTSSITVNSHRALMLSVEMQEGNNIVQFGD
NVAAKLAEIQHNLPSSIKLTTVVNQPQIVQHSVSDFIREFFLAIISVVIVTIILLPFRIA
AVAAMAIPVTVAVTFALLHTFNIELHQVSLAALIVVLGMVVDDAIVIADNYVELLDEGVD
RWTAAWRSASDLVVPVLTATATIIASFLPMVILSGSVGEFIFSLPITVSIALASSFIVAM
LLTPFLCYTFIKKGLHQVIDATQQHARPKKKSLLDYMQDGYDKAISWCVDHRTATLVFAV
VSIAASGLLFKAIRQKFFPAAERNQFVVEVWMPTGTKLEKTKEAVVKLENLIKNDSRVTN
YASFFGTSAPRFYYNFSPEPPVTYYGQMLINTHTTEETETLAEELTDKVAAVVPEGTPRV
RLMQQGSLTIAPVEVRIVGNDLNELKRLGAQVQAIVRRAPGSSLVRTDFKEDYYGVGINL
KDEANRLGFTTTGVATSIYTGFSGAPISVLYEGDQPINLVLRLDEESRRNFSDLENTYLS
SPVTGSSVPLRQIATLQPEWQTGRIMHRNGVRTLTVQCEPSGNVLPSEILKAIQPQIAKL
DLPVGYSIQYGGEDENRRATFSQMVGALGISLVLIFLILLFQFRNLKESLVVMASIPLSL
FGALLGLVLTGNPFGFTAFMGLISLSGIVVRNAIILVDYANELMRKGMDVRTAAIEAGKR
RLRPIFLTTMAAAIGVVPMILSGSPMWSPLASVLAVGVIFSMVMALLVIPVLFVMTVKKE
KTVTVATT
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatcaaaggctctttacactatccgcaagtgacgcttagcgtcgtgtttctg
gcggtagcggttggcatttattcgttgctgaccatgccccgccgggaggaccccaaaatt
acgattcgctccggtctggtggttgctttttaccccggtgccaactcggctcaggtcgaa
gatcaggtaacgcgcaaaatcgaacagtacttgtttggctacgccgaagtccgaaaagaa
aaaacgtactcgaccacccgcgacggggccgttgtcatcaacgttgaactggaagaaagc
gttaaaaacccagatattttctggtcgaaactgcggcacgatctgaatcaggccaaagtg
ctggatctgccccagggcgttcagggacccattgtcaacaccgattttggcgacacggta
gccctgctcatcggcatcgaatcagatgatctgtcgtatacggaactggaccagaatctc
aaacagattgaagacggtctgcgtacgatcaaggcggtgtctaaaattcggcgttacggc
gaacagaaagagcagattaccataacggctcgttccgcgcaaatggtgcagtacggcatt
aagtggacgcaggtcgttcaggtgttgcaggctcagaatgccatcaaagcgacaggcaat
gttaagacggaagattctcaagtcccgctttacgcgcagggctattacaataccgagcag
gaaatcagtaatcaggttattggcaccagttccaccggcgcggtcgtacggctgggcgac
gtggccacgatcaaacgcgagtataccgaaccgacatcaagcattacggtcaacagtcac
cgcgccctgatgctgtcggtagagatgcaggaaggcaataacatcgttcagtttggcgat
aacgtagccgccaagctggccgagattcagcacaacctgcctagttccatcaagctgaca
accgtggtcaaccaaccgcagattgttcagcacagcgtcagcgattttatccgcgagttt
ttcctggcgatcatctcggtggtgatcgtgaccattattctgttaccgttccgtattgcc
gccgtagccgcgatggctattcccgtgaccgttgctgtcaccttcgccctgttgcacacc
tttaatatcgaactgcaccaggtatcgctggctgcgctgatcgttgttctggggatggtg
gttgacgatgcgattgtcattgccgataactacgtcgaactgctggacgaaggcgttgac
cgctggacagccgcctggcgcagtgcgagtgatctggtcgttcccgtcctgacggccacg
gctaccattatcgcgtcgtttctgccgatggtcatcctgagcggctcggtgggcgagttt
attttctcactgcccattacggtttccattgccctggcctcctcgtttatcgtagccatg
ctgctgacaccctttctttgctacacgtttatcaagaaaggacttcatcaggtcattgat
gcgactcagcaacacgctcggcctaaaaagaaatcgctgcttgattacatgcaggatggc
tacgacaaagccattagctggtgcgtcgatcaccggaccgctacgcttgtttttgccgtt
gtgtccatcgctgcgtcgggactgctattcaaggccatccggcagaaattcttcccggca
gccgaacgaaatcagttcgtagttgaagtctggatgccgacgggtacgaagctagagaaa
acgaaagaagctgttgtcaaactggaaaacctgatcaaaaacgatagccgggttaccaat
tatgcgtccttttttggcaccagcgctccccggttctactacaatttttcgccggagcca
cccgtcacctattacggtcagatgttgatcaatacgcatacgaccgaagaaaccgagacg
ctggccgaagaacttaccgacaaagtagcggctgttgttcccgagggaacgccccgcgtc
cgattgatgcagcaaggttcgctgaccatcgccccggttgaagttcggatcgtcggcaac
gacctcaacgagctaaaacggcttggcgcacaggtgcaggccatcgttcgccgtgcgccg
ggtagttcgctcgtgcgcacggatttcaaagaagactactacggtgtcggcatcaacctg
aaagacgaagccaaccggctaggcttcaccacaacgggcgttgctacaagcatttatacc
ggcttttcgggcgcaccgatctccgtactttacgaaggggatcagcccatcaatctggtc
cttcggctcgacgaagaaagccgccggaatttttcggacctggaaaacacctacctgtca
tcgcccgttacgggcagcagcgttccacttcggcagatcgccacgctgcaacccgagtgg
caaaccggtcgcattatgcaccgcaacggcgttcggacgctgacggttcaatgcgagccc
agcggcaatgttctaccctcggaaattctgaaagccatccagccccagattgccaagctt
gatcttcccgttggctacagcatccaatacgggggtgaagatgaaaaccgccgagccacg
ttcagtcagatggttggcgcgctgggaatcagcctggtgcttattttcctgatcctactt
ttccagttccgcaacctgaaagaatcgctggtcgtcatggcgtcgattccgcttagtctg
ttcggtgccttgctgggtctggtactcaccggcaacccgtttggctttaccgctttcatg
gggctcatcagcttatcgggcatcgttgtccgcaacgccattatcctggtcgattacgcc
aatgaactgatgcgaaaaggcatggacgttcgtacagcagcgatagaagccggaaaacga
cggttgcgtccgattttcctgacgacgatggccgcagcgattggggttgtccccatgatt
ttgtcgggttcaccgatgtggagtccgctggcgagtgtccttgccgtgggggtcattttc
tcgatggtcatggcgctgcttgtcataccggttctgtttgtgatgacggtcaaaaaggaa
aaaacggttaccgtagccaccacctag
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