Spirosoma oryzicola: LQ777_21040
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Entry
LQ777_21040 CDS
T08981
Name
(GenBank) DUF4981 domain-containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
soq
Spirosoma oryzicola
Pathway
soq00052
Galactose metabolism
soq00511
Other glycan degradation
soq00600
Sphingolipid metabolism
soq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
LQ777_21040
09103 Lipid metabolism
00600 Sphingolipid metabolism
LQ777_21040
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
LQ777_21040
Enzymes [BR:
soq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
LQ777_21040
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
BetaGal_ABD2
Motif
Other DBs
NCBI-ProteinID:
UHG90717
LinkDB
All DBs
Position
complement(4990482..4993751)
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AA seq
1089 aa
AA seq
DB search
MHKRLLVSLFLVNLTASTYAQTLPDWENPAVISQNTEKPHATLVPFATEQQALTSTDWRT
SPYVKLLNGTWKFRWLKHPNQVPGDFYQPSTDDKSWDNLPVPSNWQVVGAREGRPYDRPI
FTNIKHPFPVTPPRITSDTNAVGLYRLRFTVPATFQDRAVFLHFAGVQSTCRVFLNGQPV
GYHEDSMTPAEFLVTDKLKAGENLLAVEVINWSDGSYLEDQDFWRISGIFRDVFLYATPT
TYLRDLAVTTDLDNQYRDATLKVTANVRSFSTTQVPYQLKVTLYDPKRALVFSETLNSES
ATNTGQESMVRLSKEIKAPALWSAESPTLYTLTVQLMGSDGKAVEAISQRVGFREMTLTG
GQLLVNGKPVTYKGVNRHEFDPTTGRVIGRESMIQDIKLMKQHNINAVRASHYPNATDWY
DLCDEYGLYVIDEANIESHDLWSKGQSPADKPEWRDAFVARGRAMVERDKNHPSIVIWSL
GNESDMGQNFRDMADIIRLIDPTRPIHYEGRKPYTGTSLTSFDIISTMYPTVEDMVKLME
KDPSRPVIVCEYAHAMGNSVGNLKEYWAAIDKYPRMQGGFIWDWVDQGLRLKNKAGKEFT
DHINYIDGANAGDGLVNPDRQPQPEINEVKLVYQYVKLTTPAALSVSQIQADGSIKVNVR
NTYDFQSLEPFRLEWEVIRNGEVIQRGGENNLVAKPGQTQVLTLPVHISEVVDMRQVTGN
ARAVPAPGASLVSEYFLNVTIRLKQATRWAPAGHEVASAQFPIIAKPAVQPVVGMNRILA
LKVVQSPKAVTVRGKDFTVVFDKTSGALTQWLFRNKNLVTKAPQPSLWRVPTDNDEGGGD
RSFAARWRQAGLDTIKAHPVDVKVEIRPQLVRVSCTNELTAKDGTLTQETEYLVYGTGDM
QITTSYKPSGTLPPLARIGMQFQLPATLNNLKWYGRGPFESYADRKDAAKVGLYEGKVAD
QFFPYTMAQENGNKTDVRWAELTDGSGVGLLIMSDLTTPALLNINARDYTDQALLKAKQP
ETQEVERGNVTVVNVDMAQMGLGGDDSWSPRVHSEYQLPANKTYTYSFRMRPVDARTNVA
QVIGLPLPR
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgcataaacgcttactagtctctctttttttagtcaacttaaccgcttcgacttacgcc
cagacgcttcctgattgggagaacccagcggtaatcagtcaaaataccgagaaacctcac
gcgaccctggtacccttcgctaccgagcagcaagcgttaacctcaaccgactggcgtacg
tcaccgtacgtcaagttgctcaatggcacctggaagtttcgctggttgaagcatcccaat
caggttcccggtgatttttaccaacccagtacggacgacaaaagttgggataatctgccg
gttccttccaactggcaagtagtgggtgcgcgcgaaggtagaccctacgaccgtcccatt
tttacgaatatcaaacacccgtttcccgttacgccaccgcgtataacatcggatacgaac
gccgttggtttgtatcgcctgcggtttaccgtcccggctacttttcaggatcgggctgtg
tttctgcattttgcgggcgttcaatcgacctgtcgggtttttctgaatggacagccggtc
ggctaccacgaagatagcatgacaccggccgaatttctggttaccgataagctcaaagcg
ggagaaaatctgctggccgtagaagtgatcaactggtcggatgggagttatctggaagat
caggatttctggcgaatttccgggattttccgcgatgtattcctgtacgcaacgcccacg
acctacctgcgcgacctagccgtaacaacggatctggacaaccagtatcgtgatgccact
ctgaaagtaacggctaacgtgcgctcgttttcgacaacgcaagtgccttaccaattaaaa
gttacgctgtacgatcccaagcgagctcttgttttttcggaaaccctcaattcagaaagt
gcaacgaataccgggcaggagtcgatggttcggctgagtaaagaaataaaagcgcccgcg
ctctggagcgccgaatcaccaacgctgtacacattgacggttcagctaatgggatcggat
ggaaaagccgtggaagccattagtcagcgcgttggcttccgggaaatgaccctgaccggc
gggcagttgctggtaaacggtaaacccgttacgtacaaaggcgttaaccggcacgagttt
gaccccaccaccgggcgggtaattgggcgtgagtccatgattcaggacataaagcttatg
aaacagcacaacatcaatgctgtacgtgcgtcgcattacccgaacgccacggactggtat
gacctctgcgacgagtatggtttgtacgttattgatgaagcgaacatcgaaagccacgac
ttatggtcaaaagggcaatcccccgccgacaaacccgaatggcgtgatgcgttcgtagca
cgggggcgggccatggtcgagcgcgacaaaaatcacccatccatcgtcatctggtcgttg
ggtaacgaaagcgacatggggcaaaactttcgcgacatggccgatattatccggctgatc
gacccaacgcggcctattcattacgaaggtcgtaaaccctacacgggcacatcgctgacc
agcttcgacatcatttcgacgatgtatccgactgtggaggatatggttaaattgatggaa
aaagatccgtcgcgacctgttattgtctgcgaatacgcgcacgcgatgggcaacagcgtc
ggtaatttgaaagagtactgggcggccattgacaagtatccccggatgcagggtgggttt
atctgggattgggtcgatcaggggttgcggctaaaaaacaaagcgggaaaggaatttacg
gatcacatcaattacatcgacggagccaacgccggagatgggttggtcaaccctgaccgc
cagccgcaaccggagatcaacgaggtaaagctcgtctaccaatacgtgaaattaacgacg
ccagcggctttgtcggttagtcaaattcaggccgatggttccattaaagtaaacgtgcgc
aatacctacgattttcagtcgctcgaaccgttccgattagagtgggaagttattcggaat
ggcgaggttattcagcggggtggtgaaaataatcttgtcgctaagcccggtcagacacag
gtactaacgttgccggtacacatcagcgaagttgtcgatatgcggcaggtcactggtaat
gcccgcgctgttcctgctcctggcgcatcgctggtgagcgaatacttcctgaacgtaact
atccggcttaagcaagcaacgaggtgggctccggcgggccatgaggtggcgtcggctcag
tttccgataatagccaagcctgcggtacagccagttgtagggatgaatcggattctggcg
ctcaaggtggtacagtcgccgaaggccgtaaccgttcggggaaaagactttaccgtggtg
ttcgacaaaacgagtggtgcgttgacccagtggctgttcagaaacaagaacctggtcaca
aaggcacctcagccaagcttgtggcgggtaccgaccgataacgatgaaggaggtggagac
cgttcgttcgcggctcgctggcgtcaggcaggtctggacacgatcaaagcacacccggtt
gatgtcaaggtagaaatccggccacagctggtgcgcgttagctgcacaaatgaattgacg
gctaaagacggtactctgactcaggagactgagtaccttgtttacggaacgggtgatatg
cagatcacaaccagctacaaaccttcgggaacgcttccgcccttggcccggataggcatg
cagtttcagttgccggcaaccctcaacaacctcaaatggtacggacgtggacccttcgag
agttatgccgaccggaaagatgctgccaaagtcggattatacgaaggtaaagtagctgac
cagttttttccgtataccatggcgcaggagaacggcaataagaccgacgttcgctgggcc
gaactgacagacggctcgggcgttggtttgctgatcatgagtgatctaacgacccctgcg
ttgctgaacatcaatgcgcgggactacaccgatcaggcgttactgaaagccaaacagccc
gaaacgcaggaagtagagcggggtaatgtaacggtagtcaacgtggatatggcacagatg
ggtttggggggagacgatagttggagtccacgcgttcattcggaataccagttgccggca
aacaagacctatacctattcgtttcgaatgcgtccggttgatgcgcgtaccaatgtggct
caggtaattggcctgccattaccgcgttga
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