Spirosoma oryzicola: LQ777_21880
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Entry
LQ777_21880 CDS
T08981
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
soq
Spirosoma oryzicola
Pathway
soq00300
Lysine biosynthesis
soq00550
Peptidoglycan biosynthesis
soq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LQ777_21880
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LQ777_21880
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
soq01011
]
LQ777_21880
Enzymes [BR:
soq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LQ777_21880
Peptidoglycan biosynthesis and degradation proteins [BR:
soq01011
]
Precursor biosynthesis
Amino acid ligase
LQ777_21880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
HTH_micro
Motif
Other DBs
NCBI-ProteinID:
UHG90881
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Position
complement(5178680..5180158)
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AA seq
492 aa
AA seq
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MQLKDLFYKVSLLATSGSMETEITGITMDSRKVGPGSLFVAVRGTVTDGHNFIATAVRQG
AAAILCEELPDDINPQVAYVGVLDSARSMGLVAANFYDQPSRKLKLVGVTGTNGKTSVAT
LLFRLFRGLGYRCGLLSTVQNQIDDQIIPATHTTPDVITINQLLTQMLANGCTHVFMEVS
SHSVVQERIAGLTFAGGIFTNITHDHLDFHGTFDNYIRAKKGFFDQLPATAFALTNVDDK
RGLVMLQNTAAQKETYSLQTLASFKGKILADSLFGLNMLVNDKEVWFKLIGRFNAYNLLS
VYGAAILLGEDADEVLTLLSGITPPPGRFEQVISDDKIVGIVDYAHTPDALQNVLETING
LRQANEQGYLPQVITVVGCGGNRDAAKRPVMADIACRFSNRVILTSDNPRNEDPMAILEQ
MQAGVSPVDVKKTVTIEDRHEAIRRAVSLAGPHDIILVAGKGHETYQEIKGVKYDFDDRA
VLRETFSERGNQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttaaagaccttttctataaagtatccctgctggcgacttcgggcagtatggaa
accgagattaccggtatcaccatggactcccgcaaggttggtccgggtagtttgttcgtg
gccgtgcgcggaaccgttaccgacggccacaattttatcgcaaccgccgttcgtcaggga
gccgcagcgattttgtgcgaagaacttccggatgacattaatccgcaggttgcctacgta
ggggtgctggattccgcccggtcgatgggattggtagccgccaatttctatgatcaacca
tcgcggaaactcaaattggtgggcgtaacaggaaccaatggtaaaacgtctgtggctacc
ctgctattccggctctttcgtggattaggctaccggtgtgggctgctgtcgacggttcag
aaccagattgacgatcagatcattccggccacgcatactacccccgatgtgatcaccatc
aaccagttgttgacgcagatgctggccaacggttgcacgcatgtgttcatggaggtaagc
tcacattcggtcgtgcaggagcgcattgccggcctaacctttgcgggtgggatctttacg
aacattacccacgatcacctcgactttcacggtaccttcgacaattatattcgggcaaaa
aaaggctttttcgaccagcttcctgccacggcgtttgcactgaccaatgtagacgataag
cgaggactggttatgctccagaatacggctgcccaaaaagaaacctactcgttacagacg
cttgccagtttcaaaggtaaaattctggccgatagcctgtttgggctaaacatgctggtc
aacgacaaagaggtatggtttaagctcattggtcgatttaatgcctataacctactgagc
gtttatggtgcagcgatcctgttaggcgaagatgccgacgaagtgcttacgttgttatcg
ggtattacaccaccgccgggccgttttgagcaggttatttccgacgacaagattgttggt
atcgtcgattacgctcacacgcccgatgccttgcaaaatgtgctggaaacgatcaacgga
ctgcgtcaggctaacgaacagggctatttaccgcaggtgataaccgttgtggggtgtggg
ggcaatcgcgatgccgccaagcgacccgttatggctgatattgcctgtcggttcagcaac
cgggttattcttacctccgacaatccgcgcaatgaagatccgatggcgatcttggagcaa
atgcaggctggtgtttctcccgttgatgtcaaaaaaacggtaacgattgaagatcgtcac
gaagccatccggcgagctgtttcattggctggcccacacgacattattctggtagcgggc
aaaggtcacgagacctatcaggaaattaagggcgttaagtacgattttgatgaccgggcc
gtattgcgggagactttctcggaacgcggaaatcagtaa
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