Spirosoma oryzicola: LQ777_21965
Help
Entry
LQ777_21965 CDS
T08981
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soq03009
]
LQ777_21965
Enzymes [BR:
soq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
LQ777_21965
Ribosome biogenesis [BR:
soq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LQ777_21965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UHG90898
LinkDB
All DBs
Position
5198260..5198982
Genome browser
AA seq
240 aa
AA seq
DB search
MKLNFEDLIVFENDDYILINKPPHVASLDERTSDRGGQSIVRMAKAYHPDAQLGHRLDKE
TSGILAIAKNPDAYRHLAMQFEHREVTKRYHAVANGVHDFDGISVYLPISPIKDGTAVRI
DREKGKVAETIFNTLQAYRTTTLVECMPITGRMHQIRVHLMCLKAPIVNDATYGGEPVYL
SDVKRKFNLKQGTEEQPLIQRVALHAYALTFTLLDGEEKTFVAPYPKDFGVLVKQLEKFS
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaattttgaagatctcatcgtttttgagaacgatgattacatattgattaac
aagcctcctcacgtagcctcactcgatgaacgtacgagcgaccggggtgggcaaagcatt
gtgcggatggcaaaagcctatcatcccgatgcacagcttggtcaccggcttgacaaggaa
acatcgggtattttagcgattgcaaagaatccggacgcttaccggcatctggctatgcag
tttgagcatcgcgaggttacgaaacgctatcacgcggttgcgaatggcgtacacgatttc
gacggcatttcggtatatctaccgatttcgcccattaaagacggtacagccgttcggatt
gaccgcgagaaaggtaaagttgctgaaaccatctttaacaccttacaggcttaccgcact
accacactggtcgaatgtatgcccattacaggacggatgcaccagattcgggtgcacctg
atgtgcttaaaagcgcccatcgtcaacgacgctacgtatggcggagaaccggtttatttg
tcggacgtgaagcggaagttcaacttaaagcagggaacagaagaacaacctcttattcaa
cgggttgcgcttcacgcctatgcattaacgttcacgctgctggatggcgaagaaaaaaca
tttgtagccccctacccaaaagactttggggtattggttaagcagctggaaaaatttagt
tga
DBGET
integrated database retrieval system
