Spirosoma oryzicola: LQ777_24105
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Entry
LQ777_24105 CDS
T08981
Name
(GenBank) efflux RND transporter permease subunit
KO
K18989
multidrug efflux pump
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soq02000
]
LQ777_24105
Transporters [BR:
soq02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LQ777_24105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
UHG91301
LinkDB
All DBs
Position
complement(5705255..5708689)
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AA seq
1144 aa
AA seq
DB search
MKFEQYKTLGFTNWCVENRTAIYIFTILITLGGLFVYNNLPKEQFPDIKIPQVYINTVYV
GTAPADIENTINKQIEKQLKSISGVKRIKSNALQDVSVILVEFNPDVQTAEALQRVRDAI
DKAKPDLPQKLDAGPTAQDVNFSEFPIMNINMAGNFSLKQLKEYAEDLQDVIEGMPEIRR
VDIVGALEREIQINVDLPRMQSAGLAFSDIQQAVQGENINVSGGDLNVDGVRRTVRVKGE
FTDVTQLQNLQIRTATGATVRLGDIAEVTDNFEEQQDFARLNNKSVVTLNVIKRAGANLI
SAADNIEKTIEEYKETRFPQGLDVKITADQSEPTRENVNDLINTVVLGFIFVVLVLMFFM
GVRDAIFVGLSVPLSALVAFVLMPVIGPVVGTAFTLNTIVLFAFLLGLGLVVDDAIVVIE
NSHRLFNDNKDWDIKQAVKAAAGEVFVPVFSGTLTTIAPFFPLLFWPGIVGEFMKFLPLT
LILTLFASLFVAYVINPVFAVTFMKRHEDDNHEDKQSFAEIKRPLIIMTVLAGIGYVIDR
GIGNLFVLLIILYVFNHYVLTPRLIVPFQERLLPALKNGYRRLISWVLTGWRPVFAVIAA
FGLLIATFFITGIAQPKVIFFPSGEPDYIYVYNVMPVGTDARVTDSVTKVIEKRVFKVLD
QNHATDIVNSVISNVGKNAGDPQNPDRAATPQKSKVTIAFKGNEEREGISTDSLLAKVRV
AMNGIPGTEISVEREANGPPTGKPIAIEIAGDDFNELRTLETKVRQKISQAGIKGIDQLK
SDLITNKPEIVVDINRDKAEREGISSGQVALAIRTALFGLEVSKFRDAKDEYPIMVRLKP
DDRSQIDRLLSLNIVYRDMAAGGQLRQVPITSVANINYSTTFSQINRKNQERIVTLSSDV
VPGYNANEIVAQIQNVVQEMEVPNGYTIKMGGEQEDQQESMNFLVSAFGIAILLIYLILA
TQFNSVVKPLIIFVTILLSLIGVLLGFVITGKSFSVIMSGVGIIALAGIVVKNGILLIEF
IEELRGRGVPLREAIIDAGGIRLTPVLLTASAAVLGLIPLAFGLTVDFVTLFRDFNPHLV
IGGDSSVFWNILAWTIIYGLTFSTVLTLVIVPCLYWINERVRMKYFGKKDPALERKAQLE
EELA
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgaacagtataaaactttaggattcaccaactggtgcgttgagaaccggacg
gcgatttacatcttcacgatcctgattacgctgggtgggctgttcgtttacaataactta
cccaaggagcagttcccggatatcaagattccgcaggtgtacatcaatacggtgtacgtt
ggaacggctcctgctgatattgagaacacgatcaataaacagatcgagaagcagctcaag
tcgatttcgggcgtaaagcgaattaagtcgaatgccttgcaggacgtatcggttatattg
gttgagttcaatcccgatgttcaaacggcagaagccttgcagcgggttcgggatgcgatc
gacaaagctaagccggatttgccccaaaaactggatgcaggcccaacggcgcaggatgtg
aacttctcggagtttccgattatgaacatcaacatggccggtaacttctcgctcaagcaa
ctgaaagaatacgccgaagatttgcaggatgtaatcgaagggatgcccgaaattcgtcgt
gtcgatatcgttggtgcgctcgaacgggaaattcagattaacgtcgatctaccccggatg
caatcggcgggactcgctttttcggatattcaacaggcggttcagggcgaaaatattaac
gtatcgggtggcgatctgaatgttgacggcgttcgtcggacggtccgcgtaaagggcgaa
tttacggacgtaacacaacttcagaatctgcaaatcagaacggcaacgggtgctactgtt
cggctcggcgatattgccgaagtaacggacaattttgaggagcagcaggatttcgcccgg
ttgaacaacaaatcggttgttaccctgaacgtgatcaaacgggcgggtgctaacctgatt
tctgccgccgataacatcgagaaaacgattgaggaatataaagaaacccgctttccgcag
ggactggacgtgaaaatcaccgccgatcagtcggagccaacccgcgaaaacgtaaatgac
ctgatcaatacggttgtcctgggatttatcttcgttgttcttgtcctaatgttttttatg
ggtgtacgcgacgccatattcgtcggtctatcggtacccttgtcggcgctggtcgctttc
gtcttgatgccggtaattggacctgtagtcgggacggcgtttacgctcaacacaattgta
ctgtttgccttcctgcttggtctggggcttgtggttgatgacgctattgtagttatcgaa
aactcgcaccggttgtttaacgacaacaaagactgggatatcaaacaggcggtgaaagcg
gcagcgggcgaagtgtttgtgcccgtattttcgggaacgctgacgaccattgcgcccttc
tttccgctgttgttctggccgggcattgtcggtgagtttatgaagtttctgcccctgacg
ctgatcctgacgttgtttgcatcgttgttcgtggcgtatgtgatcaaccccgtttttgcc
gtcacgtttatgaaacggcatgaagatgacaaccacgaagacaagcagagttttgcggaa
attaagcgtccactgatcattatgaccgtactagccggtatcggctacgtcatagaccgg
ggtatcggcaatttattcgttctgttaatcatcctgtacgtcttcaatcactatgtcctg
acgccaagactgattgtaccgtttcaggagcggctgttgcccgcgttgaaaaacggttat
cgccgacttatttcgtgggtgctgacgggttggcggcctgtgtttgcggtaatcgcggcc
ttcggtttactgattgctactttctttatcaccggtattgcgcagcccaaagttattttc
tttcccagcggagagccagactatatctacgtctataacgtaatgccggtaggtaccgac
gctcgcgtaacggattcggtaacgaaagtaatcgagaaacgggtgtttaaagtcctcgac
cagaaccacgcgacggatattgtcaactcggtaatttccaatgtcggtaaaaacgcgggt
gatccgcaaaaccccgaccgggccgctacgccacaaaaatcgaaggtgaccattgcgttc
aaaggtaacgaagagcgggaaggcatttcgacggattcgctgttggctaaagtccgggta
gcgatgaacggcattcctggtacggagatttcggtagaacgcgaagccaacggaccacca
acgggtaagccaatcgctatcgaaatagccggtgacgatttcaacgaactgagaacgctg
gaaacgaaagttcggcagaaaatcagtcaggcgggtatcaaaggaatcgaccagttgaaa
tcggatctgatcacgaacaagcccgaaattgtcgtcgatatcaatcgcgacaaagccgaa
cgggaaggtatttcgtcgggtcaggtcgctttggcgattcgtacggcgttattcgggctg
gaagtgtcgaagttccgggatgcgaaagacgaatatccaatcatggttcgtctgaaaccg
gatgaccgtagccagattgaccggctcctgagtttgaacatcgtataccgcgacatggca
gcgggtggacaattacggcaggttccgatcacgtcagtggcaaacatcaactattcgaca
acattcagccagatcaaccgcaaaaatcaggagcggatcgttacgttaagttccgatgta
gtgccgggttacaacgcgaacgaaattgtggctcagattcagaatgttgtgcaggaaatg
gaagtaccgaatggctacaccattaagatgggtggtgaacaggaagatcagcaggagtcg
atgaacttcctggtttcagcttttggtatcgctatcctattgatttacctgattctcgcg
acccagttcaactccgtcgtcaagccgctgattattttcgtaaccatcctgctgtcgctg
attggtgtgttgctgggctttgtgattacaggtaagtctttctcggttatcatgtcgggc
gtcggtattatcgcgctggcgggtatcgtggtgaaaaacgggattctgctcatcgaattt
attgaagagttgcgcggtcggggcgttcccctgcgcgaagcgatcattgatgcgggtggg
attcgtcttacgcccgtattgctaactgcgtcagccgctgtacttggtctgattccgctc
gcgttcggcttgacggttgattttgtgacgcttttccgtgactttaatccgcatctggta
atcggtggcgacagctctgtattctggaatattctggcctggacgattatttacggtcta
acattctcaacggtacttacgctcgtgattgtaccgtgtttatactggatcaatgagcgc
gtccggatgaagtacttcggcaaaaaagaccctgctctggaacgtaaagcacagttggaa
gaggaattagcctaa
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