Solanum tuberosum (potato): 102577454
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Entry
102577454 CDS
T02981
Name
(RefSeq) putative arginine/serine-rich protein
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03013
Nucleocytoplasmic transport
sot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102577454
03015 mRNA surveillance pathway
102577454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102577454
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102577454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
RRM_5
Motif
Other DBs
NCBI-GeneID:
102577454
NCBI-ProteinID:
NP_001274904
UniProt:
Q2XPW2
LinkDB
All DBs
Position
Un
AA seq
392 aa
AA seq
DB search
MAKPGRGRAASPSGSSSRSRSRSRSYTPSNSRSSSSRSPSRSRSRSRSISSSSSASRSAS
SRSPSRLPPSQRKSPAGVSKRGRSPPPPPPPESKKASPPPRKVSPIPESRVIHVDQLSRN
VNENHLKEIFGNFGEILHVQLAIDHVVNLPKGFAYVEFKTRIDAEKAQLHMDGAQIDGKV
VHARFTLPERKKAASPPRAVATSSRRDAPRTDNAPVDVEKDGPKRQQDLSPRRKPASPPR
RSPIGRRGSPRRGPDSPVRRRANSPFRRGSPPPQRRRPASPMRRRSPSPPLRRHRTPPRG
SPRRIRGSPGRRRSPLPPRRRSPRRARSPPRRSPIGRRSSRSPIRRPIRSRSRSISPRRG
RGPAARQWEVIILLFFSQSSQGTPQDFKESQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccaggtcgaggccgtgcggcttcaccttcaggctcgtcttctcgttctcgt
tcccggtctcgctcttacactccttcaaactctcgctcctcaagttcgcgttctccatct
cgatctagatcccgctccagatcaatttcttcatcttcctctgcttcccgcagtgcaagt
tctcgcagccctagtcgtctccctccttctcagcgaaaaagccctgctggagtatctaag
cgaggccgctcgccgccaccaccaccaccaccagagtctaagaaagcttctccacctcca
aggaaagtatctcctatacctgagtcacgtgtgattcatgtggatcagctcagcaggaat
gtcaatgaaaaccatttgaaagaaatatttggtaattttggtgaaattctgcatgtgcag
ttggccattgatcatgttgttaatcttcccaaagggtttgcttatgttgagttcaagact
agaattgatgctgagaaagcccaactacacatggatggtgcacagattgatgggaaagta
gttcatgccaggtttaccctgcctgagcgaaagaaggctgcctcacctccaagggctgtt
gcaacttcctcaagaagagatgctccaagaactgataatgcccctgttgatgtggagaaa
gatggaccaaaacggcaacaagacttatctcctcgtcgaaaacctgcctctccacctcgg
aggtctcctataggacgaagaggatctcctagacgtgggccagattctccagttcgccgt
cgagcaaattctccttttaggcgcggcagtccacctccccaaaggaggaggcctgcatct
cccatgagacgccgttcaccatcgcctccactaagacgtcatcggacacctcctaggggc
tctcccagaagaattcgtgggagtcctggtcgaagacgttctccccttccaccaaggcga
cgttctccacgacgtgctagaagtccacccagaagatctccgattggtcgtcggtctagc
cgttcacctattagaaggcctatccggtcacgatcaagatccatctctcctaggcgggga
aggggtccagctgcaagacagtgggaggtcatcatcctactcttcttctcccagtcctcg
caagggaccccgcaagatttcaaagagtcgcagtcctaa
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