Solanum tuberosum (potato): 102582465
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Entry
102582465 CDS
T02981
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sot03009
]
102582465
Enzymes [BR:
sot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102582465
Ribosome biogenesis [BR:
sot03009
]
Eukaryotic type
Pre-60S particles
Helicases
102582465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
102582465
NCBI-ProteinID:
XP_006361031
LinkDB
All DBs
Position
Un
AA seq
787 aa
AA seq
DB search
MAILVSSKAELKRREKQKKKAKSGGFESLGLSSNIFRGIKRKGYRVPTPIQRKTMPLILS
GFDVVAMARTGSGKTAAFLVPMLEKLKQHVPQAGVRALILSPTRDLALQTLKFTKELGRF
TDIRVSLLVGGDSMESQFEELAQSPDIIIATPGRLMHHLSEVDDMSLRTVEYVVFDEADC
LFSMGFAEQLHTILTRLGENRQTLLFSATLPSALAEFAKAGLRDPQLVRLDLDTKISPDL
KVAFFTVRQEEKHAALLYLIREQTTSDQQTIVFVSTKYHVEFLNILLREEGVEASVCYGD
MDHDARKIHVSRFRARKTMVLIVTDVAARGIDIPLLDNVINFDFPTKPKLFVHRVGRAAR
AGRIGTAYSLVTSDDMAYLLDLHLFLSKPIRAAPTEEEVFQDMDGVLSKIDQAVANGETV
YGRFPQTVLDLLSDRVREIIDHSTELETLQRPCTKAFGLYSKTKSRPSKESIKRVKDLPR
EGLHPMFKNDLRGNELSAMAFSERLKAFRPKQTILEAEGEAAKSKKQNQMVDVMKMKRAI
HEEVINKVRQQRSSVPASKEDDFDPTPSKRKEKQVSGSKRKSKIFKDEEYFISAVPTNQH
FEAGLAVRGNHGFESKRLDAAVLDLVADDKNGLQKQKVSYHWDKRSKKYIKLNNGDRVTA
SGKIKTESGSKGKTNKTGIYKKWKDQSHKRVSLNGTNDGNSAAQSTSLAGGPRGQDGGRN
FRGGRNNRSVPNAHVRSEIKDVDQVRKEREKKAQRASYLKTKKGKKAYKGGKKGKGNGKG
KGKGRQG
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcgattctggttagctccaaagcggagctgaaacgtagagagaagcagaagaagaag
gcaaaatcaggaggatttgagtcattaggtttaagctctaatatcttcagaggaatcaaa
cgaaaaggttacagagttcctacgcctattcagcgcaaaacaatgccacttatactctct
ggattcgatgttgttgctatggcccgtactggttctggtaaaacggcggcgttccttgtg
cctatgcttgagaaattgaagcagcatgtgcctcaagctggtgttagagctctaattctt
tctccaactagggatttggcgcttcaaacacttaagtttaccaaagaacttggtcgattc
acagatattcgggttagtttgttggttggtggtgatagtatggaaagccaatttgaagaa
ttggcacaaagtcctgatattataattgcaactcctggtcggctcatgcaccatttatct
gaggttgatgatatgtcactgcgcactgtggagtatgttgtttttgatgaagctgattgt
ttgtttagcatgggttttgctgagcaattgcatacaattctcacccgtctaggtgagaat
cgccagactctgcttttcagtgcaactttacccagtgcccttgctgaatttgccaaggct
gggcttcgagaccctcagcttgtgaggcttgatttggatacaaagataagtccagacttg
aaggttgcatttttcactgtaagacaggaggagaagcatgctgcacttctgtatctgatt
cgtgaacaaacaacttctgatcagcaaactatagtttttgtttccaccaagtatcatgtt
gagttcctcaacattcttttaagagaagagggtgttgaagcttctgtttgttatggtgat
atggatcacgatgctcgcaaaattcatgtttctagatttagagcaagaaagaccatggtg
ctcattgtgactgatgtggctgctagaggaattgatattccactgcttgataatgttatc
aactttgattttcctaccaaacctaaactttttgttcatcgagttgggcgagctgcaagg
gctggtcgtattggcactgcatattctcttgtcacatccgacgacatggcttatttgtta
gatcttcatctctttctatctaaaccaatcagggctgcaccaactgaggaagaggttttc
caagatatggatggagtcctgtccaaaatagatcaagcagttgccaatggagaaactgtc
tatggacgttttccacaaactgttctagatctcctctcagatagagttcgggaaatcatt
gatcattcaactgaactagaaactctgcaaaggccatgtactaaagcatttgggttgtac
tcaaagacaaaatcaaggccttctaaagagtccattaaaagagtaaaagacctaccccgc
gaagggttgcatccaatgttcaaaaatgacctccgtggtaatgaattatcagcaatggcc
ttttctgaacgcttgaaggccttcagacctaagcagacaatcctggaagctgaaggtgaa
gccgctaagtcaaaaaaacaaaatcaaatggttgatgtgatgaagatgaaaagagctatt
catgaggaggtcatcaataaagttcgtcaacagcgctcgagtgttcctgcttcaaaggaa
gatgattttgatcccacaccttcaaaaaggaaggagaaacaagtttctggttctaaaagg
aaatcaaagatttttaaagacgaggagtacttcataagtgcggtaccaacaaatcagcat
tttgaggctggactcgccgtgaggggaaaccatggttttgaatcaaaaaggttggatgct
gctgttctagatttggtagctgatgacaagaatgggttgcagaaacaaaaggtttcatat
cattgggataagaggagtaagaaatacatcaagctcaacaatggagatcgtgttacagct
agtgggaagataaagacagagagcggctctaagggaaaaaccaacaaaactgggatatac
aagaagtggaaagaccaatcacacaagagagtatctcttaatggaactaatgatggaaac
tctgctgcacaatcaactagtttagctggtggtcctagaggtcaagatggtggcagaaat
ttcagaggtgggagaaacaataggtcagtacctaacgcccacgtgcgatcagaaattaaa
gatgttgatcaagttcggaaggaaagagagaagaaggcccaaagagcatcatatttgaag
accaagaaggggaaaaaggcttacaaaggtggcaaaaagggaaagggaaatggaaagggt
aagggaaagggaagacaaggttga
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