Solanum tuberosum (potato): 102602101
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Entry
102602101 CDS
T02981
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102602101
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sot01002
]
102602101
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sot04121
]
102602101
Enzymes [BR:
sot01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102602101
Peptidases and inhibitors [BR:
sot01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102602101
Ubiquitin system [BR:
sot04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102602101
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP7_ICP0_bdg
USP7_C2
UCH
UCH_1
MATH
ubiquitin
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
102602101
NCBI-ProteinID:
XP_006340305
LinkDB
All DBs
Position
Un
AA seq
1116 aa
AA seq
DB search
MTIMTPAPTDQEEEEMLVPRSDLVFEGPQPMEAQAETGNDVEKQPPEDPQTSRFTWKIEN
FSRLNVKKLYSDPFVVGGYKWRILIFPKGNNVDYLSMYLDVAESANLPYGWSRYALFNLS
IVNQIHNKYSIRKETQHQFNARESDWGFTSFMPLGELYDPNKGYLVDDTCVVDAEVAVRK
IVDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSASIP
LALQSLFYKLQYSDNSIATKELTKSFGWDTYDSFLQHDVQELNRVLCEKLEEKMKGTVVE
GTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCADVYASFDKYVEVERLEGDN
KYHAEQYGLQDAKKGVLFMDFPPVLQLQLKRFEYDFSRDTMVKINDRYEFPLQLDLDREN
GKYLSPEADGSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVKR
ALEEQYGGEEEQLPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKEKIMCNVDEKDIAEHV
RARLKREQEEKEQKKKEKAEAHLYTIIKVSRDEDLRQQIGKDIHFDLVDYDKVRSFRIQK
QTLFSIFKEEVAKEFGVPVQSQRFWLWAKRQNHTYRPNRPLTHLEEAQTVGQLREVSNKV
QNAELKLFLEVELGLDLRHITPPDKTKDDIMLFFKIYDPEKEELRYAGRLFVKGTSNPTE
ILNKLNEMAGYAPDQEIELYEEIKFEPIVLCEPIDKKFAFRTNQLEDGDIVCYQKSLSSE
SRQKLRYPDVPSFLEYVQNRQVVHFRSLEKLKEDDFCLELSKINTYDEVVERVAQRLGLD
DPSKIRLTPHNCYSQQPKPQPIKYRGVDTLGDMLVHYNQTSDILYYEVLDIPLPELQGLK
TLKVAFHHATKDEVVTYTIRLPKQSTVGDVINDLKTKVEFSKPDAELRLLEVFYHKIYKI
FPTSEKIENINDQYWTLRAEEIPEEEKNLGPNDRLIHVYHFTKETAQNQMQIQNFGEPFL
LVIYEGETLAQVKVRIQKKLQVPDEEFAKWKFAFLSLGRPEYLEDSDILSNRFQRKDVYG
AWEQYLGLEHPDNAPKRIHAAYQNRPTYEKPVKIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgaccataatgactcctgctcctaccgatcaggaagaggaggagatgcttgttccgcgt
tcagatttggtatttgaaggacctcagcctatggaagcacaagcagaaaccggcaatgat
gtggaaaagcagccaccagaggatcctcaaacttcaaggtttacttggaagatagaaaac
ttctctaggttgaatgtaaagaaactatactctgacccttttgttgtcggtggctataaa
tggcggattttaatttttcccaaggggaacaatgttgattacctgtccatgtatctggat
gttgctgagtcagctaatttaccttacgggtggagtagatatgccctgttcaacttgtca
attgttaaccaaattcataacaagtactccatcagaaaagagacgcaacaccaattcaat
gcaagagaaagtgattggggtttcacatcctttatgccacttggtgaactatatgatcca
aacaaaggttatcttgttgatgatacatgtgttgttgatgctgaggtagctgtccgaaaa
attgttgactattggtcgtatgactcaaaaaaagaaactggctttgttggactgaagaac
caaggagctacctgttatatgaactcacttctccaaactctctaccatattccttacttc
aggaaggctgtataccacatgcctacaactgaaaatgatatgccctccgctagtatccct
ctagcgttgcaaagcttattctataagctccagtacagtgacaacagtatagcaacaaag
gagttgacaaaatcatttggatgggatacatatgattctttcttgcagcatgatgtgcaa
gaactcaatcgtgttctctgtgaaaagcttgaagaaaaaatgaagggtactgttgtggaa
ggcactatacagcagttatttgaagggcaccatatgaactatattgagtgcatcaatgtg
gactacaaatctacaagaaaggagtcattttatgatcttcagcttgatgtcaaaggctgt
gctgatgtttatgcttcttttgataaatatgttgaagttgaacgtctcgagggcgataac
aagtaccatgcggaacaatatggtttgcaggatgctaagaagggtgtcttatttatggat
ttcccccctgtcctgcagcttcagttaaagcgctttgaatatgatttttcgcgggacact
atggtaaagataaatgacaggtatgagttccctctgcaactcgatctagatagagagaat
ggtaaatacttgtcacctgaggcagatggaagtgtcagaaacctttacacacttcacagc
gtattagtccacagtggtggtgtgcatggtgggcactattatgctttcataaggccaact
ctttcagatcaatggtataaatttgacgatgaacgtgtgactaaagaagatgtgaaaaga
gctctagaagagcagtatggaggagaagaagagcagttgccacaaacaaatcctggattc
aataatactcccttcaaatttacaaagtactcaaatgcttacatgctggtctatattcgg
gaaagtgacaaagagaaaataatgtgtaatgttgatgagaaggacattgctgagcatgtc
agggcaaggttaaagagagaacaagaagagaaagagcagaagaagaaggagaaagcagag
gcacacctttacacaattataaaggtttctcgtgatgaagacctcagacagcagattggg
aaggacatacattttgatttagtggattatgacaaagttaggagttttcgcattcagaag
cagacactttttagcatttttaaggaggaggttgccaaagaatttggtgtaccggtgcaa
tctcaacgtttttggctatgggcaaagcgccagaatcatacatatcgtccaaatcggcca
ttaacacatctcgaagaagctcaaactgttgggcagttgagggaagtgtcaaataaggtt
caaaatgcagagctaaaattgttcttggaagtggagcttggactggacttgagacacatc
actccacctgacaagactaaagatgatattatgctattcttcaagatttatgatcctgag
aaagaagagctgaggtatgctggaagactctttgtgaagggaacgagtaatccaactgaa
atcttgaacaaactaaatgaaatggctggctatgcccctgatcaagagattgaactatat
gaggaaataaaatttgaaccgattgtcttgtgtgaacccatcgacaagaaatttgctttc
cgaacgaaccagcttgaggatggtgatatagtatgctatcagaaatccctttcttctgaa
agtcgccagaagttacggtatccagatgttccttctttcctggagtatgttcaaaatcgc
caggttgttcacttccgatccttagaaaagttgaaggaggatgatttctgtttagagctg
tcaaagattaatacatatgatgaagttgtggaaagagtagctcagcgacttggcttggat
gatccatctaaaataaggctcacaccccataattgttactctcagcaacctaaaccccag
ccaattaagtacagaggtgtagacacccttggagatatgctggtccactacaatcagaca
tctgatattttgtactatgaagtactggacattcctttgccagaattgcaaggtttaaaa
accttaaaagtagcttttcatcatgctaccaaagatgaagtggtcacttacactatcaga
ctaccaaaacaatctactgttggtgatgtaattaatgatctaaagacaaaggttgagttt
tcaaagccagatgcagaattacgattgctagaggtcttctaccacaaaatttataagata
tttccaacaagtgagaagatagagaacataaatgaccagtactggacattgcgggccgaa
gagattcctgaagaagagaaaaatctaggcccgaatgaccgtttgattcatgtgtatcac
ttcactaaagagactgcacaaaaccaaatgcaaattcagaattttggggaacctttcctc
ttggttatctatgagggtgagactttagctcaagtgaaggtgcgaatacagaagaaattg
caggtcccagatgaagagtttgctaagtggaaatttgcattcctctcacttggccgtcct
gagtaccttgaggactcagatatattgtccaaccgtttccagcgaaaggatgtttatggt
gcttgggagcagtatctcggcttggaacatcctgacaatgcccctaaaaggattcatgca
gcatatcagaatcgcccgacgtacgagaagcctgttaaaatttacaactaa
DBGET
integrated database retrieval system
