Solanum tuberosum (potato): 102602740
Help
Entry
102602740 CDS
T02981
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102602740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102602740
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102602740
mRNA degradation factors
5'-3' decay
Decapping complex
102602740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40
Motif
Other DBs
NCBI-GeneID:
102602740
NCBI-ProteinID:
XP_006352541
LinkDB
All DBs
Position
Un
AA seq
1428 aa
AA seq
DB search
MAAAGNPNQSGGTPFDMHTFFKPSTPVSTNLNTQNPINPNLISSQFMLPSASYPPPTAGG
AGGGTGGGAGGLYYPPQTTPFHNIPQFNHNTPPQYNNHQPQHDGYMHPQRSMSFPAPPLQ
PPPTPTSPHQFLNPGNNPNPNPGARLMALLSAPPSTPEVLQQPTVQLLPLQPTTSGSELS
DFSASPNVGIAHSGSSPLRMPSRKLPKGRHLNGDHVVYDIDDRLPGEVQPQLEVTPITKY
GSDPGLVLGRQIAVNKSYICYGLKLGAIRVLNINTALRSLLKGLAQRVTDMAFFAEDVHL
LASASVDGRVYIWKITEGPDEEDKPQITGRIVTAIQIVGEGESLHPRVCWHCHKQEILVV
GIGRHVLKIDTTKFGKADVFSADEPLRCPVDRLVDGVQLVGTHDGEVTDLSMCQWMTTRL
VSASVDGTIKIWEDRKPQPIAILRPHDGNPVHSATFLSAPDRPDHIILITGGLLNREMKI
WVSASKEGWLLPSDAESWHCIQTLELKSSAEARAEETFFNQVVALSQAGLLLLANAKKNA
IYVVHLEYGLNPMATHMDYIAEFTVTMPILSFTGTSDLLPHGEQIVQVYCVQTQAIQQYA
LDLSQCLPPLMENGVGFERTESNVSRDAASIEGYVPVDLPGSKQMEFPLTSAAPKTLVNE
SATEIVATARPLMTDARTALATSVEFASSIAESKSSSLPSITTDTDIAPFTSPPPLSPEL
ARKLSGFRSISNSSEPGPSVNDHFGDPKAVEYSVDRQMDAIHPNLTGLTSSDGDPMKNED
DVSRDDGSSCISNTVKFKHPTHLVTPSEILMANSSSEVNHVNEHKSEGQSSIQDVVINKE
ARDVEVEVKNVGETRFSQKTDIGSQEELHTFVSDNKEKPFCSQASDLGIEMARECRALSP
ETCIVEESRQFDGVSGTEQLIQASTAPEEDRDSAKEISGNNLDSNVQVSAHQPPASSAKG
KKQKAKNTQGFEPASPSPGSFKSSDSNEGGVSSSNTSMEAAVSQILSMREKLNQVLNMQK
ETQKQMGMMVAVPVTKEGRRLEAALGQSMEKAVKANSDALWVRYQEDSAKQEKLLRDRTQ
QITNLISNCFNKDMPGLIEKIMKKELAAVGQAVTRSIVPIIEKTVSTAISEAFQKGVSDK
AVNQLEKTVSSKLEASVARQIQAQFQTSGKQALQETVKSTMEGSVIPAFEMSCKAMFEQV
DLTFQKGFAEHTGFALQQFESMHSPLVHALRDAINSASSMTQTLSGELADGQKKLLTLAV
SGANSKSSNPLVSHMSNGPLLHEKLEAPVDPIKELSRLLAERKYEEAFTTALHRTDVSIV
SWLCLQVDLSGILSMNPLPLSQGVLLSLLQQVACDITNETSRKLSWMRDVVSAINPTDPV
IVLHVRPIFEQVYQKLNHHRTLPTTTPAELSSIRLIMHVINSMLHAPC
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgccggaaatccaaaccagtccggtggaacaccgtttgatatgcatactttc
ttcaagccttcaactccagtttcaacaaacctgaatacccagaaccccattaacccgaat
ttgatttcttcacaatttatgcttccttcagcttcttatcctccgcctactgccggcggc
gccggtggtggtacaggaggaggtgccggaggactttactacccaccccagacaacccct
tttcacaatatccctcaattcaatcacaatactcctccacagtataacaaccatcaacct
caacatgatggatatatgcatccgcaaagatctatgtctttccctgctccaccacttcaa
ccaccacccacccctactagtcctcaccagttcttgaatcctggaaataacccgaatcct
aaccctggggctcgacttatggctttgttaagtgcgccaccttcaactcctgaagttctt
cagcaacccactgtgcaacttcttcctttacagcctacaacttctgggtctgagctttct
gatttttctgcttcaccaaatgttggtattgctcattcagggagtagcccgttgcgaatg
ccgagtaggaagttacctaaagggagacatttgaatggggatcatgttgtttatgatata
gatgataggttgcctggtgaagtgcagcctcagctggaggttactcccattaccaagtat
ggttcggatccgggacttgttttaggcaggcaaattgcagttaacaaaagctatatatgt
tatggactcaaattgggagctattcgtgtgcttaacattaacaccgcgttgaggtcattg
cttaaaggtcttgcacagagggtcacagacatggctttctttgctgaggatgttcacctt
ttggctagtgcaagtgtcgatgggcgtgtttatatatggaaaattactgaaggaccagat
gaggaagataagccccaaattacagggaggattgtcactgctattcaaatagttggtgag
ggggaatctcttcatccccgagtttgttggcattgtcacaaacaagaaattcttgtggtc
gggatcggaagacatgttttaaaaattgataccacaaaatttggaaaagctgacgttttt
tcagcagatgaacccctcaggtgtcctgttgacaggttggttgatggggtacaacttgtt
ggtactcatgatggagaagtgactgatttgtcaatgtgccagtggatgaccactcgattg
gtatctgcatcagtggatggcacgataaagatttgggaagaccggaagcctcaaccaatt
gcaattctcaggcctcatgatggtaatcctgttcattcagccaccttcctgtctgctcca
gaccgcccagatcacatcatactcatcactgggggtttacttaatcgggaaatgaagata
tgggtatcagcaagtaaggaaggctggttacttcctagtgatgctgaatcatggcactgt
atacaaacattggaattgaagagttctgctgaagctcgtgctgaagagacattttttaac
caagttgtagcgttgtctcaagcaggtctgctcttattagcgaatgcaaaaaagaatgcc
atatatgttgttcatctagagtatggcctgaacccaatggcaacccatatggattacata
gctgaatttacagttacaatgccaattttgagtttcactggaacaagtgatttactgcct
catggtgaacagattgttcaggtgtactgtgtacagacgcaggctattcagcagtatgct
ttggacttatcccaatgcttgccacctctgatggagaatggtgtgggcttcgaaaggacg
gaatctaatgtttcacgtgatgctgctagtattgaaggatatgttcctgttgatcttcct
ggtagtaaacaaatggagttccctttaactagtgctgcacctaaaactttagtgaatgag
agtgccacagagattgtagctacagctagacctcttatgactgatgcacgcactgcattg
gccacctctgtggaatttgcttcttctattgcagaatctaaatcatctagtttacccagt
attactactgatactgatattgctccctttacatcaccaccacctttgagtcctgagttg
gctagaaaactttctggtttcagaagcatatcaaacagctctgagcctggtccctctgtc
aatgaccattttggggatcctaaagctgttgaatattcagttgacaggcaaatggatgcc
attcatccaaacttgactggccttacttcgtcagatggtgacccaatgaaaaatgaagat
gacgtgtcccgtgatgatggttcttcgtgtattagtaatacagttaaattcaagcaccct
actcatctagtgactccttcagagatattgatggctaactcatcttctgaggtaaaccat
gttaatgaacataaaagcgagggacaatcaagtatccaggatgttgtaatcaacaaggaa
gcccgcgatgtggaggtggaagttaagaatgttggtgaaacaagattcagtcaaaaaact
gatattggctctcaagaagaacttcatacttttgtgtcagataacaaggagaaacccttt
tgctctcaggcatctgatcttggaatagaaatggctcgagaatgtcgtgccttatcgcct
gaaacttgtattgtcgaggaatctaggcagtttgatggggtttctggaactgagcagctg
atccaagcatcaacagcccctgaagaagatcgtgactctgcaaaggagatctctggaaat
aatttagactcaaatgtgcaagtttctgctcatcaacctccagcttctagtgccaaaggg
aaaaagcaaaaggcaaagaacactcaaggatttgaaccagcttcaccctcacctggttct
ttcaagtcatctgattccaatgagggtggtgtcagctcaagtaacacctctatggaagct
gcagtctcacaaattttgtctatgcgtgagaagctaaatcaggttcttaatatgcaaaaa
gaaacgcaaaagcagatgggtatgatggttgctgttccagttaccaaagaaggaagaaga
cttgaggctgccttgggacagagcatggagaaggctgtcaaggccaattccgatgcttta
tgggtccgttaccaagaagatagtgctaaacaagagaaattacttcgtgatcgtactcaa
caaataaccaatttgatatctaactgctttaacaaggacatgccagggctaattgaaaaa
ataatgaagaaagaactggcagctgttggacaagccgtcacacgcagtattgtccctatc
attgagaaaactgtatcaactgctatttcagaagccttccagaaaggagttagtgacaag
gcagtaaaccaactggagaaaacagttagctctaaacttgaagcttctgttgctaggcaa
attcaagcacaattccagacctctggcaagcaggctcttcaggaaactgtgaaatctaca
atggaaggttcggtgatccctgcctttgagatgtcatgcaaggcaatgtttgagcaagta
gatttaacgtttcagaaaggatttgctgaacacactggtttcgctctacagcaatttgag
tccatgcattcaccgttagtacatgctttaagggatgccattaattccgcatcatcgatg
actcaaacattgagcggagagctagctgatggtcaaaagaagttgcttacgcttgcagtt
tctggagcaaattccaagtcatcgaatccactggttagccacatgagtaatggaccatta
ctgcatgagaagcttgaggctcctgttgatccaatcaaagagttatctagattgttggcg
gagcgcaagtacgaggaggcattcactacagccttgcacagaactgatgtgtctattgta
tcgtggttatgtttgcaggttgatctgtcgggtatcttatcaatgaatcctctcccgttg
agtcaaggagtacttctttcacttcttcagcaggtggcgtgtgatattaccaacgagaca
tctcgaaaattatcctggatgagggatgtggtatcagccataaatccaactgacccggtg
attgtactgcacgtgcggcctatttttgagcaagtatatcagaaactaaaccatcatcgg
actctccctaccacaacccccgcggaactttcaagcattcgtctgataatgcatgttatc
aactccatgctccatgctccatgctaa
DBGET
integrated database retrieval system