Sitophilus oryzae (rice weevil): 115875628
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Entry
115875628 CDS
T07985
Name
(RefSeq) collagen alpha-1(XVIII) chain-like isoform X1
KO
K06823
collagen type XVIII alpha
Organism
soy
Sitophilus oryzae (rice weevil)
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
soy04147
]
115875628
00535 Proteoglycans [BR:
soy00535
]
115875628
00536 Glycosaminoglycan binding proteins [BR:
soy00536
]
115875628
Exosome [BR:
soy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115875628
Proteoglycans [BR:
soy00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
115875628
Glycosaminoglycan binding proteins [BR:
soy00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115875628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
DUF1554
Motif
Other DBs
NCBI-GeneID:
115875628
NCBI-ProteinID:
XP_030746992
UniProt:
A0A6J2X733
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
MTIWRLRLLLLPSIWIFLSPTLGEDEFALPPSFAQGESPGVFDYNLLDAVKIPLQDPKTQ
YVADSEDGFPAFGFKAGSDVKMARRQILPDVLSPEFAVLISAKPRTKRGGFVFAVVNPLD
TVVELGVRIGPENGTFTVLSLFYTDYVAEVNSQIIANFTVPKFTNKWTKFAFRVTLENIT
LFFNCTEADTVSVQRKPLELVFDSASTLYLAQAGPIIGEPYEGALAHVKIYRDPGRAAEQ
CKTEFQDVVFSDEEIKNYLERNDIEHDYEDDISNDIVDNVERTDYPPFREEDSDGLGVFP
PPPPPPDGKNCFCGTKENCCNFIFDDRPAAGRYRGEKGERGPKGPPGEAIRGPPGPPGPP
GPAAVEGSCSCNVTSILSSMGITLPYSPALPALPGKEGVPGLPGEPGRPGEKGSVGPRGD
KGERGEKGPPGPPGLQGSKGEPGEDGIPGAPGPPGPAGPPGPVEFENIDPIRVKEAVMGG
SMIRPGIPGAKGETGKPGNPGPKGDRGSVGPKGNPGQKGEGGDRGLPGERGPQGPKGENG
TPGMDGIPGNPGSPGKDGSKGEPGVSGPPGLPGISISSDGLTDFVPGPPGIKGEPGEHGP
KGDPGRDGEPGLPGPAGFPGPKGDSGVDGALGPVGPPGSKGEKGERGPPGSVIMSNGNEQ
ILTLKGEKGDMGRRGRRGRPGPQGPPGPAGKGGEIGLPGWMNGKGRPGATGIPGQPGPKG
EKGDSGSGMAQKGDKGDKGDRGSDGIPGKDGIPGLPATGSNDDATRYVPVPGPPGPPGPP
GIPGLSITGPKGEPGEAIYKEAVYNLRPGPKGSLEELRAVKELKDLKDFRAGRSTASPPL
MATSDYSRGAAVPGAVTFRTREAMTRVSQDSPVGTLAYVMEEEALLVRVNGGWQYIALGS
LLPINTPTPPTTSAPQQHPPFEASNLINQLPSSPKGVVPFASRLPKMLRLAALNEPATGD
VHGVRGADYACYREAHRAGLKGTFRAFLSSRTQNVDSIVRQADRKLPVSNLRGEVLFNSW
AEMFSGDAAPFPHPPRIFSYSGKNVMTDPSWPIKSVWHGALVDGTRALDTSCDAWQTSSS
SKVGLAGSLRGPRLLDQTPVTCDKKLIVLCIEATSEVFVQRRRRAITDWTENRLLTQEEY
QHLINSIN
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgacgatttggaggttaaggttgcttttgctaccgtccatatggatttttctgtctcct
actcttggggaagatgagtttgcgttaccgccatcatttgcacaaggagaaagtcctgga
gttttcgactataacctcctggatgctgttaagattccgctccaggatcccaaaactcag
tacgtggccgacagcgaggacggtttccccgccttcggcttcaaggccggttcagatgtg
aaaatggcccgcagacagatcctgcccgacgttttaagtccggagtttgccgtgctgatc
agcgccaaacccaggacgaagcggggaggctttgtttttgcggtggtcaatccgctggac
actgtcgtcgaactaggtgttcgaataggaccagagaatggaacatttacagtattatcc
ctattctacactgactacgttgcagaggtaaactctcagattatagccaattttacagtg
ccaaagttcaccaacaaatggacgaagttcgcgttcagagtcactctggaaaatataact
ttattttttaattgtaccgaagcagacacggtatcggtgcagaggaagccattagagtta
gtgtttgattctgcctcgacactatatttggcacaagctgggccgataataggggaacca
tatgagggcgccctggcacatgtcaaaatatacagagacccaggcagggccgctgaacag
tgcaaaacggaatttcaggatgtagtgttcagtgatgaggaaatcaaaaattacttagaa
agaaacgatattgaacatgactatgaggacgatattagtaatgatatagttgacaatgtc
gaacgaacggattatccgccctttcgagaggaggacagcgacggtttaggggtgtttcca
cccccgcccccacccccggacggtaagaactgcttctgtggtactaaagaaaactgttgt
aattttatttttgacgatcgaccagctgcgggaagataccgaggagagaaaggagagaga
ggaccaaaaggacctcctggggaagctataagaggtcctccaggacctcctggaccgcct
ggaccagcagctgttgagggcagttgttcatgtaacgtaacatcaattctgagctccatg
ggaatcactctaccatactcccctgctctaccggcccttcctggaaaggaaggagtacca
ggattaccaggagagcctggtagacctggcgagaaaggatcagtgggaccaagaggagat
aaaggcgaaagaggtgagaagggtccacctggaccaccaggacttcaaggatctaaagga
gaacctggagaggatggtattcctggcgcaccgggtccaccgggaccggccggtccacca
ggtcctgtggaatttgaaaatattgatccaatacgagtgaaggaagctgttatgggtgga
tctatgatacgacctggaatacctggagccaaaggcgagactggaaaaccaggaaatcca
ggtcctaaaggcgacagaggatctgtgggcccaaagggtaatcctggacaaaaaggagaa
ggtggtgacagaggactaccaggcgaaagaggtcctcaaggtccaaaaggtgaaaatggg
actcctggcatggatggtattcctggtaatccaggatctcctggaaaagacggttcaaaa
ggcgaacctggagttagtggtcctcccggtttaccaggaatatcaatttccagtgatgga
ttaacagattttgtgcctggaccaccagggataaaaggagaaccaggagaacatggaccg
aaaggtgatccaggccgagatggcgagccgggtttacctggtccagctggatttcctgga
cctaaaggagattcaggagttgacggtgctctgggtccggtaggaccaccaggatctaaa
ggagaaaaaggtgaaagaggtccaccaggctctgtcattatgtcaaacggaaatgaacaa
attctaacattaaagggtgaaaagggcgacatgggcaggagaggtcgacgcggccgacct
gggcctcagggtcccccaggaccggcaggcaaaggaggggagataggccttccaggatgg
atgaacggaaagggaagaccaggagctacaggaatacctgggcaacctggaccaaaggga
gaaaagggagattctggatctggaatggcccagaaaggagacaagggtgacaaaggagat
cgtggttcagatggtattccaggcaaagatggaataccaggactgcccgctacaggttca
aacgacgatgcaacacggtacgttcctgttcctggaccaccaggtccccccggaccgcct
ggaatacctggattatccataactggacctaaaggtgaacctggagaagcgatttacaag
gaagcagtgtataacttgcgaccaggaccaaaaggaagcctggaagagctgcgggccgtg
aaagagctgaaggatctaaaggactttcgagcagggcgttcaactgccagtccgcccctg
atggccaccagcgactactccagaggagcagccgtgccgggtgcggtaacattccgaact
agagaggcgatgactcgggtgtcgcaagacagccccgtgggcacactagcttacgtcatg
gaagaagaggctttacttgttcgagttaacggcggttggcagtatattgcgcttggatcg
ttattaccgataaatacacctaccccaccgactactagtgcaccacaacaacatccacca
tttgaagcaagcaatctcattaatcagctgccaagttcaccaaaaggagtagttccattc
gcctctaggctgcctaaaatgttaagattggcagcgctaaacgagccggcaacaggtgat
gttcatggtgtacgaggagctgattacgcttgttatagagaagcccacagggcaggactc
aagggcactttcagagcattcctgtcatcaaggacccaaaatgtcgactcgatagtccga
caagcagatagaaaactgcctgtcagtaatctgagaggtgaagttttgttcaattcgtgg
gctgagatgttcagtggagatgctgctccattcccacatccaccaagaatattttcatat
agtggtaaaaacgtaatgacagacccgtcgtggcccatcaagtccgtgtggcacggcgcc
ctcgtggacggcaccagggcgctggacacgtcctgcgacgcctggcagacctcgtcgtcg
tccaaggtgggtctggcgggtagcctgaggggtcccaggctgctggaccagacgcccgtg
acgtgcgacaagaagctgatcgttttgtgcatagaggcgacaagcgaggtgtttgtgcag
aggcggagaagggcaataacggattggaccgaaaacagactactaacccaggaagaatac
caacacttaatcaattcaattaattaa
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integrated database retrieval system
