Sitophilus oryzae (rice weevil): 115877990
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Entry
115877990 CDS
T07985
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03022
Basal transcription factors
soy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115877990
09124 Replication and repair
03420 Nucleotide excision repair
115877990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soy03021
]
115877990
03400 DNA repair and recombination proteins [BR:
soy03400
]
115877990
Transcription machinery [BR:
soy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
115877990
DNA repair and recombination proteins [BR:
soy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
115877990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
C1_2
IBR
Motif
Other DBs
NCBI-GeneID:
115877990
NCBI-ProteinID:
XP_030750201
UniProt:
A0A6J2XGC3
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MNDDDDPKEYRWETGYEKTWEAIKEDDEGFLEASVADIILRAKRKRQAQKQSSQKLGMMR
HLYLLLDCSESMSSQDLKPTRMICTLKILEGFIEEFFDQNPISQLGIILMQNKRADKVSE
LAGNFRKHIKYLQSLSKTNLVGEPSLQNGLEVAISSLKLLPAHASREILIILGSLTTCDP
GDINTTITKLKQEGIRCSIIGLAAEVHVCRQLANETKGTYSVILDDCHFKDLLYQQVEPP
PAAVALESSLIKMGFPHQMNTEGTDEPLTMCMCHVDSIEEGSKLTTGGYYCPQCLSKYCE
LPVECRACGLTLVSAPHLARSYHHLFPAANYTELAVSNQNRFCYACQKPFGDQDKQIYEC
PSCKKIFCIDCDIFIHDILHTCPGCATDLATFQITRN
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgatgatgatcctaaagaataccgctgggagacgggttatgagaagacttgg
gaagcaatcaaagaagacgatgaagggtttttggaagcctccgtagcagatataatttta
agagcaaaaagaaaaagacaggctcaaaaacaaagtagtcagaaactgggtatgatgaga
catttgtatttacttctcgattgttcagaatctatgtccagtcaggatctaaaaccaact
cgaatgatttgtacattaaaaatattagaaggatttattgaagagttttttgatcaaaac
cctataagtcaattagggataatactaatgcagaacaaaagagctgataaagttagtgaa
cttgctggaaattttcgcaagcatattaaatatttacagtcattatcaaaaaccaattta
gttggggaaccatctctacaaaatggactggaagttgctatatcttctttaaaattacta
ccagcacatgcaagccgggagatactaattattttaggaagtcttactacctgtgatcca
ggtgatattaatacaactattactaaattaaaacaagaaggtattagatgttcaattatt
ggcttagctgcggaagtccatgtatgtaggcaattggcaaatgaaaccaaaggaacatac
agtgttattttagacgattgccattttaaagatctgttgtatcaacaagttgaaccgcct
ccagctgctgttgcacttgaatccagtttaattaaaatgggattcccacaccaaatgaat
actgaaggtactgatgaacccctaacaatgtgtatgtgtcacgtagatagcattgaggaa
ggcagtaaattgaccacagggggctattactgtcctcaatgtttgagcaaatattgtgaa
ctacctgtcgaatgtagagcttgcggtttgacattggtgtcagcaccgcacttggccaga
tcgtaccatcatttgtttccagctgccaattatactgaattggcagtatcaaatcagaac
agattttgttacgcctgtcaaaaaccatttggagatcaagataaacagatttatgagtgt
ccaagttgcaagaaaatattttgcatagattgtgatattttcatacatgatattttacac
acttgtccgggatgtgctacagatttagctacatttcagatcacacgcaattaa
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integrated database retrieval system
