Sitophilus oryzae (rice weevil): 115880476
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Entry
115880476 CDS
T07985
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115880476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soy03019
]
115880476
03036 Chromosome and associated proteins [BR:
soy03036
]
115880476
Enzymes [BR:
soy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115880476
Messenger RNA biogenesis [BR:
soy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
115880476
mRNA degradation factors
5'-3' decay
Decapping complex
115880476
Chromosome and associated proteins [BR:
soy03036
]
Eukaryotic type
Gene silencing
piRNA pathway
115880476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA
Motif
Other DBs
NCBI-GeneID:
115880476
NCBI-ProteinID:
XP_030753547
UniProt:
A0A6J2XQ84
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MITDRINMNHLTLNKLSLDAKMDSKVDSKLDDLGWKSKLKIPPKDRRIQTSDVTDTKGNE
FEEFCLNRQLLMGIFEKGWEKPSPIQEAAIPIALSGKDILARAKNGTGKTGAYSIPVLEL
IDPTKDYIQALVIVPTRELALQTSQICIELAKHLQIRIMVTTGGTNLRDDIMRIYQKVQV
IIATPGRILDLMEKEVAQMSNCKILVLDEADKLLSQDFKGMLDTVIKNLPRERQILLFSA
TFPLTVEQFMKKHLHEPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSI
IFCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRAGLCRNLVCSDLFTRGI
DVQAVNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYDDRFALHRIEQELGTEIK
PIPKIIDPKLYVAKMSIDDDIEENSK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgataacagatagaattaatatgaaccatttgacattaaataaacttagcttagatgca
aaaatggacagcaaggtagattcaaaattggatgatttagggtggaaatcaaaattaaaa
atccctccaaaagataggagaattcagacaagtgatgtaacggacacaaaaggaaacgaa
ttcgaagagttctgcctgaacagacaacttctaatgggtattttcgaaaaaggttgggaa
aaaccatcgccaattcaagaagctgctatacctatcgccctttctggcaaggatattctt
gctagagcaaaaaatggaactggtaaaactggggcatattcaataccagttttagaatta
attgatccaacaaaggactatattcaggctttggttatagtacccacgagggagttggca
ctacagacttcacaaatttgtatcgaacttgctaaacatttacagatacgtattatggtc
acgacgggaggtacaaatctacgagacgatattatgagaatctatcagaaggtacaggtt
ataattgctacgccaggacgtatattggatctcatggaaaaagaagtagcacagatgtcc
aactgtaaaatcttagtattagacgaggcggacaagcttctgtcgcaggactttaaagga
atgttggacaccgttatcaagaacttgccaagagaaaggcaaatacttctcttttctgcc
actttccccctaacggtggaacagtttatgaagaaacatttacacgagccttacgagatt
aacttgatggaagaactgacattgaaaggtgtcactcagtattacgcctttgtacaggag
aggcaaaaagttcattgcctaaacactctgttttctaagttacaaataaaccaaagtatt
atattttgtaattcaactcaacgagtcgaactgctggcgaaaaaaatcacggagttgggt
tattgttgctattacattcacgcaaaaatggctcaagcccaccgtaacagagtattccac
gacttcagagctggtctttgtcgtaatttggtgtgttcagatttattcacaagaggtatc
gacgtccaagccgtaaacgtagtgataaacttcgacttcccgaaaatggccgagacttac
ctgcatcgtatcggcaggtccggacgtttcggccatttgggtatcgccatcaacctgatc
acatacgacgacaggttcgctttgcaccgcatcgagcaggaattaggcacggagatcaag
cccatcccgaaaatcatcgatcccaagctgtacgtggcgaaaatgagcatcgacgacgat
atagaagaaaactcgaagtaa
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