Sitophilus oryzae (rice weevil): 115884208
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Entry
115884208 CDS
T07985
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115884208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soy03041
]
115884208
Enzymes [BR:
soy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115884208
Spliceosome [BR:
soy03041
]
Complex A
U2 snRNP components
U2 related factors
115884208
Complex B
115884208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
115884208
NCBI-ProteinID:
XP_030758568
UniProt:
A0A6J2Y431
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MARSHTPERRRRRSRSRSKERSKPSKRRSKSRERRRSRSKERSARDRSRSKERSARDRER
SRSRDRDVRERDRDRDRDRDRDRERARDKDRDRDRERDRNRDRDRDRDRRDRRGDSKEKK
SSRRRSRSRTPEKKDDSGLSFDPANLDKEEEQKKLELEMQKRRERIERWRAERKKKEQEA
VKKDAKTGSLTTNLTLPQGAIKKWSLEDDSEDEDKSDEKADIKKENDTEIKEEKVEKMEV
VEKIVTKPEESNGKKDDEEDDVDPLDAFMKGVHEEVRNINKINVKKEDSSDSNKKGALVI
VTGVAKKKANTDKGEIIEQNQDGLEYSSEEEAEDLKDTAANIANKQRKDLAKIDHNNIVY
ITFRKNFYVEVPEIAKMTQEEVDAYKEELEGIRVKGKGCPKPIKTWAQCGVSTKELNILK
KMGFDKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLEETDGPIS
IIMTPTRELCMQIGKDIRKFTKSLGLHSVCVYGGTGISEQIAELKRGAEIIVCTPGRMID
MLAANSGKVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQME
ALARRILMKPIEVQVGGRSVVCKEVEQNVVILEEDQKFLKLLEILGLYQEQGSIIVFVDK
QENADILLKDLMKAGYNCMSLHGGIDQFDRDSTIVDFKSGKVKLLVATSVAARGLDVKQL
ILVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYTFVTPEQCRYAGDIIRAFELASVAVPEA
LRKLWEDYKTKQESEGKKVHTGGGFSGKGFKFDENEAAIANERKKFQKAALGLQDSDDED
LEQDIDQQIESMFATKRTVKEIKAPLGINPAAAQGAGAGSAVDKLELAKKLASKITFTKT
SSFDTKFAPQQAAESILKDMKLFLGTSSSLPITAKTVAEQLAAKLNNKLNYQPKDDEDKM
DEDNEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYSEAGITVRGTYVPTGKSPPD
GERKLYLAIESTSDMAVSKAKSEITRLIKEELLKLQTSGHHMINKNRYKVV
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggccagaagtcatactccagagcgaagacgacgccgatctcgttcaagaagtaaagaa
agatctaaacctagtaaaagaagaagcaaatccagagaaaggagaaggagtcgttcaaaa
gaaagatctgccagagatagaagcagatctaaggaaagatcagctagggatcgtgaaaga
agtcgttctagagatagagatgtgagggaacgtgatagagatagggaccgtgatagggat
cgggatcgcgagagggctagagataaagatagggaccgagatagagagagagaccgtaat
agggatcgtgatcgtgatagggatcgtagggatagaaggggtgatagtaaggaaaaaaag
tcatccagaagaagatctaggtccagaacgccagagaaaaaagatgattcaggattatct
tttgatccagcaaatttagacaaagaagaggaacagaaaaaactggagcttgaaatgcag
aaaagacgggaaaggattgaaagatggagagccgaaagaaagaagaaagaacaggaagct
gttaaaaaagatgccaaaacggggtctttaacaacaaatctaactcttcctcaaggtgcc
attaaaaagtggtctttagaggacgattcggaagatgaggataagtcagatgaaaaagct
gatataaagaaagaaaacgatacagaaattaaagaggaaaaagttgagaagatggaggta
gtagagaaaatcgtaactaagcctgaggagtcaaatggtaaaaaagatgatgaggaagat
gatgtagatcccttagatgcattcatgaagggtgttcatgaggaagttagaaatattaat
aaaataaatgtaaaaaaagaagacagctcagactcaaataaaaagggagctttggtgata
gttacgggtgttgctaagaagaaagcaaatacagacaagggtgaaattattgaacaaaat
caggatggattagaatattcatctgaagaagaagctgaagatttaaaagacacagctgca
aatatagcaaataaacaaagaaaagacttggctaaaattgatcataataatattgtgtat
ataacttttaggaaaaacttttatgttgaggtgcctgaaattgccaaaatgactcaggaa
gaagttgatgcatataaagaagaattagaaggcatcagagtcaaagggaagggttgccca
aaaccgataaaaacatgggcccaatgtggagtttctacgaaggaactgaatattttgaag
aaaatgggttttgacaaaccaactcccattcaggcccaagcaataccagccataatgtct
ggtagggatttgattggaatagcaaaaacaggcagtggaaagacattagcttttctttta
cccatgtttaggcacatacttgaccaacctcctctagaagaaactgatggaccaatatca
attattatgacgccgaccagggagttgtgcatgcaaattgggaaagacattagaaaattc
accaagagtttaggactgcattcggtttgtgtgtatggtggtacaggaatttcagaacaa
attgctgaattaaagagaggtgccgaaattattgtttgtactcctggcagaatgattgat
atgttagcagcaaatagtggaaaagtcacaaatttaaggcgtgtgacttatattgttttg
gatgaagccgatagaatgtttgatatgggttttgaaccacaggtcatgagaataattgac
aatgtccgaccagatagacaaactgtcatgtttagtgccacttttccaagacagatggag
gctttagcgcgtagaattcttatgaaaccaatcgaggttcaagtaggaggtagatcagta
gtttgtaaagaagttgaacaaaacgttgtaattctggaggaggatcagaagttcttgaag
ttactggaaattctgggtctttaccaggaacagggcagcataatagtttttgtggataag
caggagaatgcagatatactgttgaaggatttaatgaaagcaggatataactgtatgtcc
ttgcacggaggaattgatcaatttgatagggactctacaattgtggattttaagtcggga
aaggtaaaattgttagtagctacttctgttgcagccagaggtcttgatgttaaacaatta
attttagtggttaactatgactgccctaatcattatgaagactatgttcatagatgtggc
cgaacgggtagggcaggcaacaaaggttttgcctacacttttgtaactccggaacaatgt
aggtatgctggcgatattattagggcctttgaacttgctagtgtggctgtacctgaggca
cttagaaagttgtgggaggattataaaaccaaacaggagtcagaaggaaagaaagttcac
acaggtggaggttttagcggcaaaggtttcaagtttgacgaaaacgaagccgcgatcgct
aatgaaaggaaaaagttccaaaaggccgctttggggcttcaagatagcgacgacgaagat
ctcgagcaagacatcgatcagcaaattgaaagcatgtttgctacaaagagaactgttaag
gaaatcaaagctcctcttggtatcaatccagcagcggctcaaggtgctggcgctggttcc
gcagttgataagctagagttagctaagaagttggcttcgaaaattacatttaccaaaaca
agcagttttgatactaaattcgcaccacaacaagcagcagaatcgattcttaaagatatg
aaattgtttttaggtaccagttcttcgttgccgataacggctaagaccgtagccgaacag
ctggctgccaaattgaacaataagctgaattatcaacccaaagatgatgaagataaaatg
gacgaggataatgagcagacgttcagaaaatacgaggaggaattggagatcaatgatttc
ccgcaacaggctagatggcgtgtcacttcaaaggaggccttagcacaaatatccgaatat
tccgaggcaggcatcacagtgaggggtacttacgtccccacaggcaaatcgccacccgat
ggtgaaagaaaactgtacttggccatcgagagtacctccgatatggccgtgtctaaagcc
aagtcggaaatcaccaggttgatcaaggaagaattactgaagttacagacttcaggtcat
catatgataaacaagaacagatataaagtggtgtag
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integrated database retrieval system
