Sphingomonas panacisoli: FPZ24_05105
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Entry
FPZ24_05105 CDS
T07288
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
spai
Sphingomonas panacisoli
Pathway
spai00521
Streptomycin biosynthesis
spai00523
Polyketide sugar unit biosynthesis
spai00541
O-Antigen nucleotide sugar biosynthesis
spai01100
Metabolic pathways
spai01110
Biosynthesis of secondary metabolites
spai01250
Biosynthesis of nucleotide sugars
Module
spai_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
spai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FPZ24_05105 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FPZ24_05105 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FPZ24_05105 (rfbC)
Enzymes [BR:
spai01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FPZ24_05105 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QDZ06934
UniProt:
A0A5B8LH47
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All DBs
Position
1007003..1007569
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AA seq
188 aa
AA seq
DB search
MPNVSLLHPRRFSDSRGWFAEVYSEPAFEKLGIVCHFVQDNHALSISPFTLRGLHFQTPP
HAQAKLVRCVRGRIFDVAVDVRRNSPSFGQWVGAELSADNGDQLFVPAGFAHGYLTLESN
CEVAYKCSAVYAPEHDGGIRWDDPTIGVVWPLPKGIRPQLSAKDEAQPLIADFVSSFDYD
GHPLTSLS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatgtcagtctcctgcacccccgccgctttagcgattctcgcggctggttcgcc
gaagtatattccgagccggccttcgaaaaactcggcattgtctgccacttcgtgcaagac
aatcatgctctttcgatatcgcctttcacgctacgtgggctgcatttccagacaccgccc
cacgcccaagccaagctcgttcgttgcgtccgcggacgtatcttcgacgttgcggtcgac
gttcgacgcaactcgccttccttcgggcagtgggttggagcggaattgtcggccgacaac
ggtgaccagctattcgttcccgcgggttttgcgcacggctatttgacgttggaatccaat
tgcgaggtcgcctacaagtgctctgcggtgtatgcgccggagcatgatggcggcattcga
tgggacgatccgaccatcggtgtcgtttggcccttacccaagggtattcgaccgcagctc
tcggccaaggacgaagcgcagccgttgatcgcagatttcgtcagttcgttcgactatgat
ggacatcccctaacgtcactaagctga
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