KEGG   Saccharomyces paradoxus: SPAR_L00620
Entry
SPAR_L00620       CDS       T08193                                 
Name
(RefSeq) Ssl1
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
spao  Saccharomyces paradoxus
Pathway
spao03022  Basal transcription factors
spao03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    SPAR_L00620
  09124 Replication and repair
   03420 Nucleotide excision repair
    SPAR_L00620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spao03021]
    SPAR_L00620
   03400 DNA repair and recombination proteins [BR:spao03400]
    SPAR_L00620
Transcription machinery [BR:spao03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     SPAR_L00620
DNA repair and recombination proteins [BR:spao03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     SPAR_L00620
SSDB
Motif
Pfam: Ssl1 C1_4 VWA_2
Other DBs
NCBI-GeneID: 54632152
NCBI-ProteinID: XP_033767783
UniProt: A0A8B8UVN6
LinkDB
Position
XII:156070..157449
AA seq 459 aa
MAPVVVSESEEDEDRVAITRRSKRQVHFDGDGDDRVDQQQQHSNHRDRDRHAQRKKKKRL
SNRNLQGSNGGYAWEDEIKRSWDLVKVDDEGDMASLVASIVEARKKRTAKKNITPYQRGI
IRSLILTLDCSEAMLEKDLRPNRHAMIIQYAIDFVHEFFDQNPISQMGIIIMRNGLAQLV
SQVSGNPQDHIDALKSIRKQEPKGNPSLQNALEMARGLLLPVPAHCTREVLIVFGSLSTT
DPGDIHQTIDSLVSEKIRVKVLGLSAQVAICKELCKATNYGDESFYKILLDETHLKELFN
EAVTPLPVNKINKGFTLVKMGFPTRIFEDTPTFCSCHSKLVYGGYFCPNCHSKVCSLPTV
CPCCDLMLILSTHLARSYHHLMPLKTFAEVPTTEKFRSEDCFSCQSRFPILKNNKNGKLL
TSSRYRCEDCKQEFCVDCDLFIHEILHNCPGCESKPLIT
NT seq 1380 nt   +upstreamnt  +downstreamnt
atggctcctgtagtagtttcagaatctgaagaggatgaggatagagttgctattacaaga
agaagtaagagacaggttcattttgatggtgatggagatgatcgtgtagaccaacagcaa
cagcattcaaaccatagagatagggataggcatgcgcagcgtaagaagaagaaaaggctc
tcgaatagaaacctacaaggttccaatggtgggtacgcttgggaagatgagatcaagaga
agttgggatttggtgaaagtggacgatgaaggggatatggcatcccttgtggctagcatt
gtagaggccagaaagaaacgtacagctaaaaagaatataacgccatatcaaagaggcatc
atcagaagtttaatattaaccctagattgcagtgaagctatgctggaaaaggatttgaga
ccaaacagacatgcaatgattattcagtatgccatagattttgtccatgaattttttgat
caaaatccaatatctcaaatgggtattatcataatgagaaacggcttggcacagctagtc
agccaagttagcggaaacccgcaggatcacattgatgcgttgaaatccatcaggaaacag
gaaccaaaggggaacccctccttgcaaaatgcattagaaatggcaagaggcctcttactg
cctgttcctgcacattgcacaagagaagtgctgattgtgtttggtagtctttccacaact
gatcctggcgatattcaccaaactattgattcgttagtttctgagaaaattagagtgaag
gttctggggttgtcagctcaagtggccatttgtaaagaattatgtaaggcaacaaactat
ggtgatgaatccttctataaaattttactcgatgaaacccacctaaaggaactattcaac
gaggctgttactcctttacccgttaacaagattaataagggtttcacacttgtaaagatg
gggttcccgacaagaatatttgaagatactccgacgttttgctcatgccattccaagtta
gtttacggcggatacttctgtcccaattgtcacagtaaggtttgttcattgcccacagtc
tgtccatgctgtgacttgatgttgatcctttcaacccacttggctagatcatatcaccat
ctaatgccattgaaaacatttgccgaagtacccacaacagaaaaatttcgatcagaagac
tgctttagttgccagtcaagatttcccatacttaaaaataataaaaatggtaaactacta
acaagttctcgctatcgttgtgaggattgtaaacaagaattttgtgttgattgcgattta
ttcatccatgaaatccttcataactgtccaggttgtgaatccaagcccctaataacttaa

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