Saccharomyces paradoxus: SPAR_O01520
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Entry
SPAR_O01520 CDS
T08193
Name
(RefSeq) Dnl4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
spao
Saccharomyces paradoxus
Pathway
spao03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SPAR_O01520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spao03400
]
SPAR_O01520
Enzymes [BR:
spao01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
SPAR_O01520
DNA repair and recombination proteins [BR:
spao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
SPAR_O01520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
BRCT
RNA_ligase
mRNA_cap_enzyme
Fve
Motif
Other DBs
NCBI-GeneID:
54633581
NCBI-ProteinID:
XP_033769156
UniProt:
A0A8B8UZL5
LinkDB
All DBs
Position
XV:complement(326069..328903)
Genome browser
AA seq
944 aa
AA seq
DB search
MLSAIGSIPEPQNFAPSPDFKWLCEELFVKIDEAQFDGTTGTGKSRSLKYYEIISNFVEM
WRKTVGNNVYPALVLALPYRDRRIYNIKDYVLIRTICSYLKLSKNSATEQRLKDWKQRVG
KGSNLSSLLVEEIAKRKTEPSGKAITIDDVNGHLDELSKDRNASGRGFRNLVKSNPFLYC
LENMSFVELKYFFDIVLKNRVIRGQEHKFLNCWHPDAQDYLSVVSDLKVVTSKLYDPKVR
LKDDDLSIKVGFAFAPQLAKKVNLPYEKICHTLHDDFLVEEKMDGERIQVHYMNYGKFIK
FFSRRGIDYTYLYGASLSSGTISQHLKFTNSVKECVLDGEMVTFDARRQVILPFGLVKGS
AKEALSFDNINNVDFHPLYMVFDLLYLNGTSLTPLPLHQRKKYLNRILTPLKNMVEIVRS
SRCYGVESIKKSLEVAISLGSEGVILKYYNSSYNVASRNNNWIKVKPEYLEEFGENLDLI
IIGRDSGKKDSFMLGLLVLDEKEMYKKDQGNSSEVVDDSNQGENIQNSRKKVKKILSFCS
IANGISQEEFKEIDRKTRGHWKRTSDVVPPSILEFGSKIPTEWIDPSESIVLEIKSRSLD
NTETNMQRYATSCTLYGGYCKRIRYDKEWTDCYTLDDLYENRAAKVNPSHQAEKSQLGLV
RKKRKRVLISDNFHQNREQKPISNIFAGLFFYVLSDYVTKDTGVRITRGELEDSIVKHGG
KLIYNVVLKRHCIGNVRLISCKTTTECKALIDRGYDILHPSWVIDCMTYKKLILIEPIYC
FNVSQKLRAVAEKRVDCLGDSFENDISEVKLSLLYKSQLSIPPTGEVEIDSEVQLFPLFL
FSNRIVYIPRCKIGMKDEILEMKIRLFGGKITDQQSLCNLIIIPYNDPILRKDCIKEVNE
KIKEQIKAFETIPKIARIVAPEWVDHSINENCQVPEEDFPVVNY
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgctatcagcaataggttccatacccgagccccaaaactttgcgcctagcccagatttc
aagtggctttgtgaagagctatttgtgaaaatagatgaagctcaatttgatgggacaact
ggaactggtaaatcaagatctttaaagtactatgaaataatttcgaatttcgttgagatg
tggagaaaaaccgtaggaaataatgtatatccagcactggttctcgctcttccctaccgc
gatagacgaatctataatattaaggattacgtattaataagaactatatgctcttacttg
aagttgtcaaaaaattctgcaacagagcagcggttgaaggattggaaacagcgcgtaggt
aagggtagtaatctttcttctcttcttgtggaagaaattgccaaaagaaagactgaacca
agtggaaaagcgattacaattgatgatgtcaatggccatctagatgaattaagtaaagac
aggaacgcttccggacgaggatttaggaatcttgtcaagtcaaatccttttctatattgt
ctggagaatatgagttttgtcgagttaaaatacttctttgatatcgtgcttaaaaataga
gtaataagaggtcaagagcataaatttctaaactgctggcatcctgatgctcaagactac
cttagcgtagtatccgatttaaaggtagtaacttcaaaactctatgacccaaaagttcgt
ctaaaggatgatgatttgagtataaaagttggctttgcattcgctccccaattggccaaa
aaggtgaaccttccatatgaaaagatatgccatacactacatgatgatttcttggtggaa
gaaaaaatggacggagaacgaattcaagttcattatatgaattatggtaaattcataaaa
ttttttagtaggcgaggtatcgactatacttatctgtacggagcaagtttatcatcagga
actatatcgcaacatttgaagtttacaaatagtgttaaagaatgcgttttggatggtgaa
atggtgacgtttgatgcaaggaggcaagtaattctcccgttcggtcttgttaaaggaagt
gcgaaagaagcgttatcctttgataatataaataacgttgattttcatcccttatatatg
gtgttcgatctattataccttaatgggacctcgttgacaccattgcctcttcatcaaaga
aagaaatatctgaacagaattttaacacctttgaagaatatggtagaaatagtacgatca
tcaagatgttatggtgtagaatcaatcaaaaagtctttggaagttgcgatctcactgggt
tcggaaggtgttattttgaaatattataattcgagttataatgttgccagtcgaaacaac
aactggatcaaggtgaaacctgaatatttggaagaatttggagagaatttggatttaata
ataataggtagagactctggaaaaaaagattcttttatgctagggctacttgtgctagat
gaaaaagaaatgtataaaaaggaccaaggaaactcctctgaagtcgtagatgactcaaat
caaggagaaaacatccaaaattcaaggaaaaaggtgaaaaaaattctttcattttgttcc
attgccaacggtatatctcaagaagaattcaaagagatcgaccgcaaaacaagaggacac
tggaaaagaacgtccgacgtcgttcccccttccattttagagtttggttcaaaaatacct
accgaatggattgaccctagtgaatctattgttctagaaataaaatcgcggtctttagat
aacacggaaacaaacatgcagaggtatgctaccagttgtactttatacggtggctattgt
aaaagaatacgatacgacaaggagtggacagattgttatacacttgacgacttatatgaa
aatagggcggctaaagttaatcctagccatcaagcggagaagtctcaacttggattggta
cgcaaaaagaggaagagggtgctaatttcagacaactttcaccaaaacagggaacaaaag
ccaatttcgaacatctttgccggattatttttttatgttctttccgactacgttaccaaa
gatactggagtaagaattacacgaggagaacttgaagacagtattgtgaaacatggtggt
aagctgatatataatgtagttttaaaacgtcattgcattgggaacgttcgtctaatcagt
tgtaaaaccaccacggaatgcaaggctttgatagatcgaggatacgatatattgcaccct
agttgggtgatcgattgtatgacatataaaaagctcattctgatcgagccaatttattgc
tttaacgtctctcaaaaattgagagccgttgctgaaaaaagggtggactgtttgggtgat
agtttcgaaaatgatatttcggaagttaaactgtcgttattgtataaatcacagctaagt
ataccaccgacaggggaagtcgagatagattctgaagtccaattgtttccattatttttg
ttctccaacaggatagtatacataccgcgttgcaaaatcggtatgaaagatgagatttta
gaaatgaaaattaggttgtttggcggaaaaataacagatcaacagtctctttgtaactta
ataatcataccatataatgaccctattttgagaaaagactgcataaaggaggtaaacgaa
aaaataaaagagcaaataaaagctttcgaaactatacccaagatagccaggatcgttgcg
cctgaatgggtggatcattctataaatgaaaactgtcaagtgcctgaagaagatttcccc
gtagtcaactattga
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