Stenotrophomonas pavanii: STNY_R06730
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Entry
STNY_R06730 CDS
T07567
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq00300
Lysine biosynthesis
spaq00550
Peptidoglycan biosynthesis
spaq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
STNY_R06730
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
STNY_R06730
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spaq01011
]
STNY_R06730
Enzymes [BR:
spaq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
STNY_R06730
Peptidoglycan biosynthesis and degradation proteins [BR:
spaq01011
]
Precursor biosynthesis
Amino acid ligase
STNY_R06730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
PreAtp-grasp
Motif
Other DBs
NCBI-ProteinID:
BCX42514
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Position
758959..760467
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AA seq
502 aa
AA seq
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MSPSMLLSQLLPDVALAGHDPVLTGLVLDSRAVRPGNAFVAIAGFGAHGLGFVEQARAAG
ASAILFEPPAPADLPAPADAIAVPGLRARMGAMADQFHGAPSRAMAMVGVTGTNGKTSTV
QLLAQAWHLLGTPSGSIGTLGAGLYGAVEPTGFTTPLVLQMHALLAQLRDAGARAVAMEV
SSHALDQGRVDAVHYDVAVFTNLTRDHLDYHGDMASYGAAKARLFHRPGLKAAVINLDDA
FGRQLFAGLPASVQPIGLSSRGAEDASVRAEALQLDGRGIAFELVIDGQRAAVQSPLLGR
FNVDNLLAVAGTLHAQGQPLPRIAEVLSALQPIRGRMNRLGGENGLPTVVVDYAHTPDAL
EQALDSLQGHLHGALFCVFGCGGERDTGKRPQMAAIAERLANQVIVTDDNPRGEDGDVIV
ADILAGFQNADAVTVQRSRARAIGLAVKRAGAGDIILIAGKGHEPYQEVNGVRHDFDDTE
VAAAALAAKAGVLEAQAGEGAA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgagtccttcgatgttgctttcgcagttgcttccggacgtggccctggcgggtcatgat
cccgttctgaccggcctggtgctggacagccgtgccgtgcgccccggtaacgccttcgtc
gccatcgccggtttcggcgcgcatggcctgggctttgtcgagcaggcgcgcgctgccggt
gccagtgccatcctgttcgaaccgccggcaccggccgatctgccggcaccggccgatgcg
atcgccgtgccgggcctgcgcgcgcgcatgggcgcgatggccgatcagttccatggcgca
ccgtcgcgggcaatggcgatggtcggcgtgaccggcaccaacggcaagacctccaccgtg
cagctgctggcccaggcctggcacctgctcggaacgcccagtggcagtatcggcacgctg
ggcgccggactttatggtgccgtcgagccgaccggcttcaccacgccgctggtgctgcag
atgcatgcgttgctggcccagctgcgcgacgccggtgcgcgcgcggtggcgatggaagtc
agctcgcatgcgctcgaccagggccgcgtggacgccgtgcactacgacgtggcggtgttc
accaacctcacccgcgaccatctggattaccacggcgacatggccagctacggcgcggcc
aaggcgcggctgttccatcgcccgggcctgaaggcggcggtgatcaacctggacgatgcc
ttcggccgccagctgttcgcgggcctgccggccagcgtgcagccgatcgggctgagctcc
cgtggtgccgaggacgccagcgtgcgcgccgaggcgctgcagcttgacggtcgtggcatc
gccttcgaactggtcatcgacggccaacgcgctgcggtgcagtcgccgctgctgggccgc
ttcaacgtggacaacctgctggccgtggccggtaccctgcacgcgcaggggcagccgctg
ccgcgtatcgccgaagtgctgtcggcgctgcagccgatccgtggccgcatgaaccgcctc
ggcggcgagaatggtctgccgaccgtggtggtcgactacgcacataccccggacgcgctg
gagcaggcgctggacagcctgcagggccacctgcacggcgcgctgttctgcgtgttcggc
tgcggtggcgagcgcgataccggcaagcgcccgcagatggcggcgatcgccgagcgcctg
gccaaccaggtcatcgtcaccgacgacaacccgcgtggcgaagacggcgacgtgatcgtg
gccgacatcctggccggcttccagaacgccgatgccgtgaccgtgcagcgcagccgcgcg
cgcgcgatcggcctggcggtgaagcgcgccggtgccggcgacatcatcctgatcgccggc
aagggccacgagccgtaccaggaagtgaatggcgtgcgccatgacttcgacgacaccgaa
gtggccgcggctgcactggcggccaaggccggtgttctagaggcacaggccggggagggc
gccgcatga
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