Stenotrophomonas pavanii: STNY_R24270
Help
Entry
STNY_R24270 CDS
T07567
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq00500
Starch and sucrose metabolism
spaq01100
Metabolic pathways
spaq01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
STNY_R24270 (glgX)
Enzymes [BR:
spaq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
STNY_R24270 (glgX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Glyco_hydro_31_2nd
Motif
Other DBs
NCBI-ProteinID:
BCX44228
LinkDB
All DBs
Position
complement(2629174..2631294)
Genome browser
AA seq
706 aa
AA seq
DB search
MASRKWAQTSRVREGRPFPLGATWDGLGVNFALYSRHATRVELCLFDARNREVERIALPE
YTNEIWHGYLPDVRPGQRYGYRVHGPYAPEEGHRFNPHKLLLDPYAKQIVGELKWAPHLF
GYTLGHRDGDLSFDRRDSAGYMPRCAVIDPAFSWGAERAPATPWDRSVIYEAHVRGLTMQ
HPAVPLAERGTFSALRHDALVDHLSDLGVTAIELLPVHAYVDDQQLLERGLRNYWGYNTI
GFFAPQPRYLSLGTVAEFKQMVARLHNAGIEVILDVVYNHTAEGNELGPTLSFKGIDNAS
YYRLADDRRYYINDTGTGNTFDLTNAGALRMVMDSLRYWVTEMRVDGFRFDLATILGRER
HGFDASGSFLDAVRQDPILSQVKLIAEPWDIGPGGYQLGQFPPGWAEWNDRFRDTVRALW
RGDGGQLPEFATRFTGSADLFDHHGRRPSASINLVTAHDGFTLHDLVSYNDRHNEANGED
NRDGHSHNLSSNHGVEGDTDDPAILSVRARQMRNLLATLLLAQGTPMLLAGDEFGHSQQG
NNNAYCQDNPLSWIDWERAAQPAAQAQVAFVRRALSLRRRYGLLRRNRFLRGEYDEALGL
RDIDWRDPDGRAMEAADWHDPALRALLIILDGRSPDSGLREPGRHVSLALLLNAGDQPQQ
FRVSDEALSFRRVLLQTDETPVEPDEAGSWTLPPRSLCLLAASSSA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggccagccgtaaatgggcgcagacctcgcgcgtgcgcgaagggcggcccttcccgctg
ggggcgacctgggacgggctgggcgtgaacttcgcgctgtactcgcggcatgccacccgg
gtcgaactctgcctgttcgacgcgcgcaaccgcgaagtggaacgcatcgcgctgccggag
tacaccaatgagatctggcatggctacctgccggatgtgcggcccgggcagcgctacggc
taccgggtgcatggcccgtatgcgccggaggaaggccatcgcttcaatccccacaagctg
ttgctggacccctacgccaagcagatcgtcggcgagctgaaatgggcgccgcacctgttc
ggctacacccttggccatcgcgatggcgacctcagcttcgaccgccgcgacagcgccggc
tacatgccgcgctgcgccgtgatcgatccggccttcagctggggcgccgaacgtgcgccg
gccacgccctgggaccgcagcgtgatctacgaagcgcacgtgcgcgggctgaccatgcag
catcccgccgtcccgctggccgagcgcggcacgttctccgcgctgcgccacgacgcgctg
gtcgatcatctcagcgacctcggcgtaaccgccatcgagctgctgcccgtgcatgcctat
gtggatgaccagcagctgctcgagcgcggcctgcgcaactactgggggtacaacaccatc
ggcttcttcgcgccgcaaccgcgctacctgtcgctgggtacggtggccgagttcaagcag
atggtcgcgcggctgcacaacgccggcatcgaggtgatcctggacgtggtctacaaccac
accgccgagggcaacgagctgggccccacgctgtcgttcaagggcatcgacaacgccagc
tactaccgcctggccgatgatcgccgctattacatcaacgataccggcaccggcaatacg
ttcgacctgaccaacgccggcgcgctgcgcatggtgatggactcgctgcgctactgggtg
accgagatgcgggtggacgggttccgtttcgacctggccaccatcctcggccgtgagcgg
catggcttcgacgcttcgggcagcttccttgatgccgtgcgccaggacccgatcctgagc
caggtgaagctgattgccgagccatgggacatcggcccggggggctaccagctgggccag
ttcccgccggggtgggcggaatggaacgaccgcttccgcgatacggtgcgcgcgctgtgg
cgcggcgatggtgggcagctgccggaattcgctacccgcttcaccggttcggccgacctg
ttcgatcaccatggccggcgaccctcggccagcatcaacctggtgaccgcacacgacggc
ttcaccctgcatgacctggtgagctacaacgatcgccacaacgaagccaacggcgaagac
aaccgcgatggccattcgcacaacctctccagcaaccatggggtggagggcgataccgat
gatccggcgatcctgtcggtgcgtgcgcggcagatgcgcaacctgctggccacgctgctg
ctggcgcaggggacgccgatgctgctggccggcgatgagttcgggcattcgcagcagggc
aacaacaacgcctactgccaggacaatccactgagctggatcgattgggagcgtgccgcg
cagccggcggcgcaggcgcaggtggcgttcgtgcggcgcgcgctgtcgctgcggcggcgc
tacggcctgctgcgcaggaaccggttcctgcgcggtgaatacgatgaagcgctcggcctg
cgtgatatcgactggcgggaccctgatggccgcgcgatggaggcggcggactggcacgat
ccggcgctgcgggcgctgctgatcatcctggacggtcgcagccccgacagcggcctgcgc
gagccggggcggcatgtcagccttgcactgctgctgaatgccggcgaccagccgcagcag
ttccgagtctcggacgaggcgttgtcgttccggcgcgtactgctgcagaccgatgagacg
ccggtggagccggacgaggcgggcagctggaccctgccgccgcgcagcctgtgcctgctg
gcggccagcagcagcgcctga
DBGET
integrated database retrieval system
