KEGG   Saprolegnia parasitica: SPRG_00615
Entry
SPRG_00615        CDS       T04137                                 
Name
(RefSeq) UV excision repair protein Rad23
  KO
K10839  UV excision repair protein RAD23
Organism
spar  Saprolegnia parasitica
Pathway
spar03420  Nucleotide excision repair
spar04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    SPRG_00615
  09124 Replication and repair
   03420 Nucleotide excision repair
    SPRG_00615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:spar03051]
    SPRG_00615
   03400 DNA repair and recombination proteins [BR:spar03400]
    SPRG_00615
Proteasome [BR:spar03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    SPRG_00615
DNA repair and recombination proteins [BR:spar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      SPRG_00615
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin CUE Rad60-SLD Dsc3_N Ubiquitin_5 Rad60-SLD_2 Ubiquitin_2 Death DUF3135
Other DBs
NCBI-GeneID: 24123251
NCBI-ProteinID: XP_012194230
UniProt: A0A067D6B3
LinkDB
Position
Unknown
AA seq 422 aa
MKLTVKTLQGVAFPIEAELTDTVLSVKAKIEQQNGSAVDLQKLIHAGKVLKDESPLSEYN
VKENDFLVVMVTKPKAAKKPAAAPAAAPAATPAAAPVAAPVAASVATPAAPAPAAPTATP
AAAQAEAPAAPAGIVVGEALSATIQQLCDMGFPEDQVRLALQAAFNNPDRAVEYLMNGIP
DTRQIPVGGAPAAAAPAAPSAAGGLAGTNSLEALRNHPQFDALRRLIQSNPAALPTVLQQ
IGGQSPELLRLIHANQEQFVRMLNEPIAEAAPADQGGFGDMDDMGGAMPTPQQLQQLMAS
LSPEQQAQMAAQMGMTPQQLQQFSQMLSQMPPEAVQQMMQQMGGGAPGAGAPTRIHLTEE
EAAAINRLVDMGFDRNEAVQAYLACDKNEALAANFLMDSMSGDYDDAAGGNFGGDSNDDI
YG
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaagctcaccgtgaagacgctccaaggcgtggccttccccatcgaggccgagctcacc
gatacggtgctcagcgtcaaggcgaagatcgagcagcagaacgggtcggccgtcgacctg
caaaagctcatccacgcgggcaaggtccttaaggacgaaagccccctctcggagtacaac
gtcaaggagaatgacttcttggtcgtgatggtcaccaagcccaaggcggcgaagaagccg
gcggctgcgcccgctgcggccccagcggctaccccggcggcggctcccgtcgcggccccc
gttgccgcgtctgtggctaccccggcggcccctgccccggcggcccccacggctacgcct
gctgctgctcaagctgaggcccccgctgctcccgctggcatcgttgtcggtgaagctctc
agcgctacgatccagcagctctgcgatatgggctttccggaagaccaggtccgcttggcc
cttcaggccgccttcaacaaccccgaccgcgccgtcgagtatttgatgaacggtattccc
gacacccgtcagatccccgtcggtggcgcacctgctgccgccgctcccgccgctccgtcg
gctgccggcggtctcgccggtaccaactcgctcgaagcgctccgcaaccacccccagttt
gacgcgcttcgccgcttgatccagtccaacccggcggcgctcccgaccgtgctccagcag
attggcggccagagcccggaattgctgcgcttgatccacgccaaccaggagcagtttgtg
cgcatgctcaacgagccgatcgcggaagccgcgccggccgaccaaggcggctttggcgac
atggacgacatgggcggcgcgatgccgacaccgcagcagctccagcagctcatggcgtcg
ctgtcgcccgagcagcaggcgcaaatggcggcgcaaatgggcatgacgccgcagcagctg
cagcagttttcgcaaatgctgagccaaatgccgcccgaggccgtccagcaaatgatgcag
cagatgggcggcggcgcgcccggcgcgggcgcgcctacgcgtatccacctcacggaagag
gaggctgcggccatcaaccgccttgtcgacatgggctttgaccgcaacgaggccgtccag
gcgtacttggcgtgcgacaagaacgaagcattagcagccaacttcctcatggacagcatg
tcgggcgactacgacgacgcggccggcggcaactttggcggcgactcgaacgacgacatt
tatggttga

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