Saprolegnia parasitica: SPRG_00615
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Entry
SPRG_00615 CDS
T04137
Name
(RefSeq) UV excision repair protein Rad23
KO
K10839
UV excision repair protein RAD23
Organism
spar
Saprolegnia parasitica
Pathway
spar03420
Nucleotide excision repair
spar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SPRG_00615
09124 Replication and repair
03420 Nucleotide excision repair
SPRG_00615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
spar03051
]
SPRG_00615
03400 DNA repair and recombination proteins [BR:
spar03400
]
SPRG_00615
Proteasome [BR:
spar03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
SPRG_00615
DNA repair and recombination proteins [BR:
spar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
SPRG_00615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
CUE
Rad60-SLD
Dsc3_N
Ubiquitin_5
Rad60-SLD_2
Ubiquitin_2
Death
DUF3135
Motif
Other DBs
NCBI-GeneID:
24123251
NCBI-ProteinID:
XP_012194230
UniProt:
A0A067D6B3
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All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MKLTVKTLQGVAFPIEAELTDTVLSVKAKIEQQNGSAVDLQKLIHAGKVLKDESPLSEYN
VKENDFLVVMVTKPKAAKKPAAAPAAAPAATPAAAPVAAPVAASVATPAAPAPAAPTATP
AAAQAEAPAAPAGIVVGEALSATIQQLCDMGFPEDQVRLALQAAFNNPDRAVEYLMNGIP
DTRQIPVGGAPAAAAPAAPSAAGGLAGTNSLEALRNHPQFDALRRLIQSNPAALPTVLQQ
IGGQSPELLRLIHANQEQFVRMLNEPIAEAAPADQGGFGDMDDMGGAMPTPQQLQQLMAS
LSPEQQAQMAAQMGMTPQQLQQFSQMLSQMPPEAVQQMMQQMGGGAPGAGAPTRIHLTEE
EAAAINRLVDMGFDRNEAVQAYLACDKNEALAANFLMDSMSGDYDDAAGGNFGGDSNDDI
YG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgtgaagacgctccaaggcgtggccttccccatcgaggccgagctcacc
gatacggtgctcagcgtcaaggcgaagatcgagcagcagaacgggtcggccgtcgacctg
caaaagctcatccacgcgggcaaggtccttaaggacgaaagccccctctcggagtacaac
gtcaaggagaatgacttcttggtcgtgatggtcaccaagcccaaggcggcgaagaagccg
gcggctgcgcccgctgcggccccagcggctaccccggcggcggctcccgtcgcggccccc
gttgccgcgtctgtggctaccccggcggcccctgccccggcggcccccacggctacgcct
gctgctgctcaagctgaggcccccgctgctcccgctggcatcgttgtcggtgaagctctc
agcgctacgatccagcagctctgcgatatgggctttccggaagaccaggtccgcttggcc
cttcaggccgccttcaacaaccccgaccgcgccgtcgagtatttgatgaacggtattccc
gacacccgtcagatccccgtcggtggcgcacctgctgccgccgctcccgccgctccgtcg
gctgccggcggtctcgccggtaccaactcgctcgaagcgctccgcaaccacccccagttt
gacgcgcttcgccgcttgatccagtccaacccggcggcgctcccgaccgtgctccagcag
attggcggccagagcccggaattgctgcgcttgatccacgccaaccaggagcagtttgtg
cgcatgctcaacgagccgatcgcggaagccgcgccggccgaccaaggcggctttggcgac
atggacgacatgggcggcgcgatgccgacaccgcagcagctccagcagctcatggcgtcg
ctgtcgcccgagcagcaggcgcaaatggcggcgcaaatgggcatgacgccgcagcagctg
cagcagttttcgcaaatgctgagccaaatgccgcccgaggccgtccagcaaatgatgcag
cagatgggcggcggcgcgcccggcgcgggcgcgcctacgcgtatccacctcacggaagag
gaggctgcggccatcaaccgccttgtcgacatgggctttgaccgcaacgaggccgtccag
gcgtacttggcgtgcgacaagaacgaagcattagcagccaacttcctcatggacagcatg
tcgggcgactacgacgacgcggccggcggcaactttggcggcgactcgaacgacgacatt
tatggttga
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