Saprolegnia parasitica: SPRG_04626
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Entry
SPRG_04626 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
spar
Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spar03036
]
SPRG_04626
Chromosome and associated proteins [BR:
spar03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
SPRG_04626
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
AAA_22
DUF4449
CHDCT2
DUF5076
Motif
Other DBs
NCBI-GeneID:
24127060
NCBI-ProteinID:
XP_012198425
UniProt:
A0A067CJ38
LinkDB
All DBs
Position
Unknown
AA seq
1358 aa
AA seq
DB search
MSIEKIMGHKTEPHLQFLIKWKGYSYMHASWETEETLLQIDPNNKYKIKRFLEKVAGPRE
VSPDDEVEYFNPEYLEIHRILDIRQEAAGEAPDDGKRLLIKWRVLSYAECTWERACDIVD
DDAMKRYAHRVTLPLSPPAPIRPSIRDFKKLETSPTFGSDGRFTLREYQLEGLNWLRWNW
HNARPSILADEMGLGKTIQTLAFLDDMRQQYHIPGPFLVVAPLSLIAQWQSECETWTEMD
CVVYHGPSEARDIIQQYEFYHLVHGKPDKKKPYKFQILVTTYEIAIKDIALLSKIQWQCL
VVDEAHRLKNQSSRLVEQMRSLKRSYCVLLTGTPLQNKTEELWALLNFLDPDAFPQLAHF
MGQFGSLQDANQVAELHKILKPYLLRRVKEDVEKALPPKEETIIEVELTTVQKQWYRAIY
ERNTAFLMRGTNPSNAPNLMNVMMELRKCCNHPYLNNGVEDALCEGLESEAQRYEMLVKC
CGKMVLLDKLLPRLKEGGHKVLIFSQMVRVLDLLEDYIRTSGHLYERLDGNIRGNERQAA
VDRFVKPEYQRFIMLLSTKAGGLGLNLTAADTVIIYDSDWNPQNDLQAQARAHRIGQTHS
VKIYRLITRKTYEMHMFHKASLKLGLDRAVLTHMRQEQDKETKKPATKSKAQEAQEIDEL
LKRGAYDVFRDEDDASEQFCSADIDTLLQRSSQIVQYEAQARGSFSKASFVSAATADDVD
IDDPDFWKKAVGLAEPEAVDEASSLVLSSQRKRTRVARFGTTKDLVSDDEDEDEIKKDNE
KALAVSREWTVNGRDRLQRALMHFGFGRWEIVRSQSGGSRSVEEVETFARAFVLVCGLCC
SGATQASDSTFVQSAIRAASTVKSEYLTNVDDREVWTERATEHIPIVLQEDDFVSKLKQG
GARRVLSRLDILSRLQHKINAACEAIAARDNLVLPLDLDARVDLVGLDRLLEGLGTVNVP
DRPQWSALTPWWDTSADKNLCAGVFLHGYGRCAQILGDPRIVFQQREAAFEPSPACDDEP
TPVKFQQPEVQQMNRLLIWLLSIEDVQRQKQQEKRDKSSSEVVRTTTLEQSQKVAVLRRQ
DALTWQLVHLDLLRHSVQLQNAQVWSLVADASETGFVKDWSVDEGQSVSYVLSLCGAPLL
LSSYGEWSWLQVVEAARVHKSAARTQRYAYDRVLGKCHELLGKDLCAPRSQNEVTFVDPF
QVAALHGAKAKVLAGLLLRRTQVYRAVSHVLHNQEGELRRLLRSGLPWLCDGMPAWWCPW
RHDMALLQAVLRFGVGAFLQLHHHGELCVRRVVDHVHKAFVANGRPRDESMVFTSPLDFK
QWLLAMCVSFPAVQLLDKSSCGYALRSRTAYRRCTRAS
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcgagaagattatggggcacaagacggagccgcatctccaatttctcatcaag
tggaagggctactcgtacatgcacgcgtcgtgggagacggaagagactctcctgcagatc
gatccgaacaacaagtacaagatcaagcgctttctcgagaaagtggcggggccgcgcgag
gtctcgccggatgacgaggtcgagtacttcaaccccgagtacctcgagatccaccgcatc
ctcgacattcggcaggaggctgcaggtgaagcacccgacgacggcaagcgattgctcatc
aagtggcgtgtgctctcgtacgccgaatgcacgtgggagcgcgcctgtgacatcgtcgac
gacgatgcgatgaaacgatacgcccatcgcgtgacgctgcctctgtcgccgcctgcgcca
atccggccctccattcgagacttcaaaaagctagagacgtcacccacgttcggtagtgac
ggacgcttcaccttgcgcgagtaccaactcgaggggctaaactggctgcgctggaactgg
cacaacgcgcgcccgagcattctagccgacgaaatgggtcttggcaagaccatccagacg
ctggcgttcctcgacgacatgcgacagcagtaccacatcccagggccgtttctcgtcgtc
gcgccgctttctctcatcgcgcagtggcagagcgagtgcgagacgtggaccgagatggac
tgcgtcgtgtatcatggaccgtccgaggcacgggacatcattcaacagtacgagttttac
cacctcgtgcacggcaagcccgacaagaagaagccgtacaagtttcagatcctcgtcacg
acgtatgagattgcgatcaaggacattgcgctgctctcgaagattcagtggcaatgcctc
gtcgtagacgaggctcaccgattgaagaaccagtcgagtcgcctcgtcgagcagatgcgc
agcctcaagcgcagctactgcgtcttgctcaccgggacgccactccagaacaaaacggaa
gaactttgggctctcctcaactttctggacccggatgcgtttccgcagctggcgcatttt
atgggacagtttgggtccctgcaagacgcgaaccaggtcgcagagctgcacaagattcta
aagccgtacttgctgcgccgcgtgaaggaagacgtcgagaaggcactgccgcccaaggaa
gaaactatcatcgaggtcgagctcacgacggttcagaagcagtggtaccgcgccatctac
gagcgcaacactgcgttcctcatgcgcggaaccaacccgagcaacgctcccaacttgatg
aacgtcatgatggagcttcgcaagtgctgcaaccatccgtacctcaacaacggcgtcgaa
gacgcactttgcgagggccttgagtccgaggcgcagcgctacgaaatgctcgtcaagtgc
tgcggcaagatggttctccttgacaagctgcttccacggctcaaggagggcggtcacaag
gtgctcatcttcagccaaatggtgcgcgtcctggatcttcttgaagactacatacgcacc
agtggccacctgtacgagcgtctcgatggcaacattcgcggcaacgagcgccaagctgcc
gtagatcgtttcgtcaagcccgagtaccagcgcttcatcatgctcctatccacgaaagca
ggtggccttgggctcaacctcacggcggcggacacggtcatcatttacgactcggactgg
aatccgcagaatgacctccaagcccaggcacgtgcgcaccgcatcggacagacgcactcg
gtcaagatttatcgcctcattacgcgcaagacgtacgagatgcacatgttccacaaggcg
agtctcaagctcggcttggaccgggctgtgcttacgcacatgcgccaagaacaagataaa
gagacaaagaagcctgcgacgaagtccaaggcccaagaagcacaggagatcgacgagctc
ctcaagcgcggtgcttacgatgtgttccgcgacgaagatgacgcgtcggagcagttttgt
tcggccgacattgacacgctcctccagcgcagctcgcagatcgtgcagtacgaagcacaa
gcccgcgggtcgttttcgaaggccagcttcgtttcggcagcgactgcagacgacgtcgac
atcgatgatccggacttttggaagaaggccgttggtctcgctgagcccgaagccgttgac
gaagcgtcatcgctcgtgcttagctcgcagcgaaagcgaactcgcgtcgctcgctttggc
acgacgaaagacttggtctcagacgatgaggacgaggacgagatcaagaaggacaacgag
aaggcactcgcggtctctcgcgagtggaccgtcaacggccgggatcggctccagcgcgcc
cttatgcactttggctttgggcgatgggaaattgtccgcagccagagtggcgggtcacga
tccgtcgaagaagtcgaaacgtttgcccgtgcgttcgtgctcgtgtgtggactgtgctgc
agcggcgcgacgcaagcgagcgactcgacgtttgtccagagcgcgatacgcgccgcgtca
acggtcaagtccgagtaccttacaaacgttgatgaccgcgaggtgtggaccgagcgcgca
acggagcacattccgattgttctccaagaagacgacttcgtgtccaagctcaagcagggt
ggtgctcgacgagtgctatctcgacttgacattctcagccgcctccaacacaagatcaat
gccgcgtgtgaagcaattgcagcgcgggacaacctcgttctgcctctggacttggacgcg
cgggtcgatcttgttggcttggatcgactcctcgagggtctcggcacggttaacgtgccg
gatcgcccgcagtggtctgccttgacgccgtggtgggacacgtcggcagacaagaacctg
tgcgcgggtgtcttcttgcacggttacggacgctgcgctcaaatccttggcgacccccgc
atcgtgtttcagcagcgtgaggctgcgtttgaaccgtcgccggcgtgcgacgatgaaccg
acgccagtcaagttccagcagccagaagtgcagcaaatgaatcggctgcttatttggctt
ctctccattgaagatgtccagcggcaaaaacagcaagagaagcgtgacaagtcgtcatcc
gaggttgtacgcacgacaacgctcgagcagtcgcaaaaagtcgcagttcttcggcgacaa
gacgccctcacgtggcagcttgtgcaccttgacctactccggcattcggttcaactccaa
aacgcgcaggtatggtcactcgtggcagatgcaagcgagacaggcttcgtcaaggactgg
agcgtcgacgagggtcagtctgtgagctacgttctcagcctctgtggcgcgccgctgctc
ttgtcgagctacggggaatggagttggcttcaagtcgtcgaggcagcgcgcgttcacaag
tccgcagcgcgcacgcagcgctacgcgtacgaccgcgtgctcggcaaatgccatgagctt
ctgggcaaggacctttgcgcgccacgatcgcagaacgaagtgacgtttgtggacccgttc
caagtcgccgcgttgcatggagccaaagccaaggtgctcgcaggcttgctcttgcgacgg
acgcaagtttaccgtgcagtttcgcacgtcctacacaaccaagagggcgaactgcgacga
ctgcttcgatcaggtcttccatggctctgtgacgggatgcctgcatggtggtgcccgtgg
cgccacgatatggcgctgctgcaagcagtgctgcgctttggcgtcggagcgttcttgcag
ttgcatcaccatggtgagctgtgtgtgcgccgtgtcgttgaccacgtgcacaaggcgttt
gttgcaaatggacgtccgcgcgatgagtcgatggtgttcacgtcgccgctcgacttcaaa
cagtggttgctcgctatgtgtgtgtcgtttccagcggtgcagttgctcgacaaaagctca
tgcggctatgctttgcgctcacggacagcctaccgacgatgcacgagagcaagctga
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