Saprolegnia parasitica: SPRG_04860
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Entry
SPRG_04860 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K14296
nuclear pore complex protein Nup153
Organism
spar
Saprolegnia parasitica
Pathway
spar03013
Nucleocytoplasmic transport
spar03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SPRG_04860
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
SPRG_04860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_04860
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SPRG_04860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RanBP
SBSN_GxHH_rpt
Motif
Other DBs
NCBI-GeneID:
24127278
NCBI-ProteinID:
XP_012199391
UniProt:
A0A067CGZ1
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MKRAHDDEDGRRAGSWASWTRVLKHVPLLSSFLGDEHEPAPAPPTPTRRPKSPLKTAPLS
PARRSGFTFARIGLSDDQPEAEAKAEPVLDSSVHDQGDDEQYVPGTYSEPVVRYARARTD
EPLVPINLFEERPAKQAKLSRGALIKSYALSREERRLKRPAPSRLLAAQSMDERQEHAKA
VTDRILATLQALETDPLAQEAKKPLPSMSMSWKKYHLEVQDDATTTNDVDMSSESPKAAF
PTQSLPIFAPLPPVVQPPTSVGPPPVLSTVTVAPTPAPSAPAVFVAPKPATTTVRKAAGN
VFTFGLPPKDTEFTSKESLMNVPVAYAFSKPPSMKVAPVKALTSQKPAMQPLQVVPTAAP
VASPPTFSKPTAPTTSTGSNPLDKFKQSAPGGWKCPSCYVANKDTQTKCPCCNTDKPSAT
PVVAAAPVALSLPVPVAPTSTPAPAMDSGNPLARFLVQAPGTWQCPGCKVRNKAAQAKCP
CCNTDQPTAEPAPVAATEPESKKKRKASDDGSSAPAKTVFAFTAPTAEAPAPVDVTDKPL
PTFGFSAPPAKSAAGVSFGISSTDKPADKPAAGFSFTAPAADKPADKPAAGFSFSAPAAD
KPADKPAAGFSFSAPASDKPADKPAAGFSFTAPVADKPADKPAAGFSFSAPVADKPADKP
AAGFSFSAPASDKPAAGFGFSAPASDKPAAGFGFGASTADKTSTGFGFGASSASADKPAE
KPALGFGFGAATSTDKPEEKKTSMNFGFGADKPADAAAKPVEKPAEKATMSFGFGATADK
AAPSLGFGAAKDTTEKPALTPSADKALSFGADKPTASPSFTFGANKTAETPAPSTSFNFG
ASADKPATAFGDKPTFTFGGAPTETPAFSTPATTEATRNATPSSFGFGSSAPTTFGASTS
AFASPSPTTAFGAAPAATPAAPAPAFNAAPSFGAPAPAAGAGFGAAPAPSAFGARQLPRP
LAPRRRSVATTTTTVALARRRPLHSGGAPGFGAPNGFGAAPAAPFGGGFNAAPPAAAGGF
SMGQAPPKQSGGPRRIVRARSVRK
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagcgcacgacgacgaggacgggcgccgggcaggctcctgggccagctggacg
cgcgtgctgaagcatgtcccgctcttaagctccttcctaggcgacgaacatgagcccgcg
ccggcgccgcccacgccgacgcgccgccccaagtcgccgctcaagacggcgccgctctcg
ccggcgcgccggtcgggcttcacgttcgcccgcattggcctcagcgacgaccagcccgag
gccgaggccaaggccgagcccgtcctcgactcgagcgtgcacgatcaaggcgacgacgag
cagtatgtgcccggcacgtactcggagccggtcgtgcggtatgcgcgcgcgcgcacggac
gagccgctcgtgccgatcaacttgtttgaagaacggccggccaagcaggccaagctctcg
cgcggcgccttgatcaagtcgtatgctctttctcgcgaagagcgccgcctgaagcgcccg
gcgccgagccgcctcctcgcggcgcagtcgatggacgagcggcaagagcacgccaaggcc
gtcacggaccgcatcctcgcgacgctccaggcgctcgagacggacccgctggcgcaagag
gcaaagaagccgctcccgagcatgagcatgtcgtggaagaagtaccatctcgaggtgcaa
gacgacgcgacgacgacgaacgacgtggatatgtcgagcgagagccccaaggccgcgttc
ccgacgcagagcctgcccatctttgcgccgctgccgccggtcgtccagccgccgacgtcc
gtgggcccgccgcccgtgctatcgaccgtgaccgttgccccgacgccagcgccgtcggcg
ccggcggtctttgtcgcgcccaagccagcgactaccaccgtgcgcaaggccgccggcaac
gtgtttacgtttggcttgccgcccaaggacacggagtttacctcgaaggagtcgctcatg
aacgtgcccgtcgcgtacgccttctccaagccgccgtcgatgaaggtcgcacccgtgaag
gcgctcacgtcgcagaagccggccatgcagccgctgcaggttgtgccgacggcggctccg
gtcgcgtcgccgccaacgttttccaagccgacggcgccgacaaccagcaccggctccaac
ccactcgacaagtttaagcagtcggcgcccggtggctggaagtgcccgtcgtgctacgtc
gccaacaaggacacgcagaccaagtgcccatgctgcaacacggacaagccgtcggccacg
cccgtcgtcgccgccgcacctgtcgcactgtcgctccctgtacccgtggccccgacgtcg
acgccagcgccggccatggacagcggcaacccgctggcgcgcttcttggtccaagcaccc
gggacgtggcagtgtccgggatgcaaggtgcgcaacaaggcggcgcaggccaagtgcccg
tgctgcaacacggatcagccgacggccgagcctgcgcccgtggctgcgaccgagcccgag
tcgaagaagaagcgcaaggcctcggacgacggcagcagcgcgccagccaaaacggtgttt
gcattcacggcaccgacggccgaagctccggcgccggtcgatgtcacggacaagccgctg
ccgacgtttgggtttagcgcgccaccggccaaaagtgcggctggcgtttcctttggcatc
tcgtcgaccgacaagccggcggacaagccagctgcgggctttagcttcactgccccggca
gccgacaagccggccgacaagcccgccgccggcttcagctttagcgctcccgcggccgac
aagccggcagacaagcctgctgcgggcttcagcttcagcgctcccgcgtcggacaagccg
gcagacaagcctgccgccggcttcagcttcactgccccggtggccgacaagccggcagac
aagcctgctgctggcttcagctttagcgctccggtggccgacaagccggccgacaagcct
gctgcaggcttcagcttcagcgctcccgcgtcggacaagcctgctgccggctttggcttc
agcgctcccgcgtcggacaagcctgctgccggctttggcttcggcgcgtcgacggctgac
aagacctcgaccggctttgggtttggtgcctcttctgcgtctgcagacaagccggcggag
aagcctgccttgggctttggctttggtgctgcaacgtcgaccgacaagccggaagagaag
aagacgtcaatgaactttggctttggcgctgacaagcccgcggatgctgccgccaagccg
gtggagaagcccgctgagaaggcgaccatgtcgtttggctttggcgcgacggcggacaag
gcggcgcccagtttgggttttggagcggccaaggacacgaccgagaagcctgcgttgacg
ccgtctgccgacaaggcgctttcgttcggcgcggacaagcccacggcgtcgccgtcgttt
acgttcggcgccaacaagacggccgagacgcccgccccgtcgacgtcgttcaactttggc
gcgtcggccgacaagccggcgaccgcgtttggcgacaagccgacgtttacgtttggcggt
gcgccgaccgagacgcctgcgttcagcacgccggcgacgacggaagccacgcgcaacgcg
acgccgtcgtcgtttggctttggcagcagcgcaccgacgacctttggcgcgtcaacctcg
gcctttgcctcgccgtcgcccacgaccgcctttggtgctgcaccggccgcgacgccggct
gctcccgcacctgcctttaacgctgcgccgagctttggcgcccctgctcctgcagcgggt
gctggctttggcgcggcgccggctccctcggcctttggcgcccgacagctccctcggcct
ttggcgccccgacggcgttcggtggcaacaacaacaacaacagtggctttggcgcgccgg
cggcctctgcattccggcggggccccagggtttggcgcgcccaatggcttcggtgctgct
cccgcggctccgtttggcggcggcttcaacgcggcgcctcctgctgctgcggggggtttc
tcgatgggccaggcgccgcccaagcaaagcggtggcccgcgtcgtattgtgcgggcgcgc
tcggtacgcaagtag
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