Saprolegnia parasitica: SPRG_05292
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Entry
SPRG_05292 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
spar
Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spar03009
]
SPRG_05292
Enzymes [BR:
spar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SPRG_05292
Ribosome biogenesis [BR:
spar03009
]
Eukaryotic type
Pre-60S particles
Helicases
SPRG_05292
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DBP10CT
ATP_sub_h
RNR_N
Motif
Other DBs
NCBI-GeneID:
24127694
NCBI-ProteinID:
XP_012199282
UniProt:
A0A067CU93
LinkDB
All DBs
Position
Unknown
AA seq
826 aa
AA seq
DB search
MSNNTDKKNKSGGFQALGLSPPIFKAVMAMGYKVPTPIQRKSLPHVLSGKDVVAMARTGS
GKTAAFLIPMLEKLKEHSKKIGVRALILSPTRELAVQTIKFAKSLAKFTDIKCGLIVGGD
SLEQQFELLGTNPDVLVATPGRLMHLLQEIPEFTLAAMEYVCFDEADRLFEMGFAEQLQE
ILTSMPASRQTLLFSATLPQALVQFARAGLTEPELIRLDVESQISDQLKISFFTMRTEDK
PSALVYLLRDVIPSTEQTIVFAATRHHVEFLHELLLSCHIDSSCVYGDMDQTSRKINIGK
FRAKKTPILIVTDVAARGIDIPLLNNVLNYSFPSTPKLFVHRVGRAARAGRSGMAFNFVD
PDEMPYMVDLHLFLGRRLEDTCPADVPGYTLADMTVDQVHYGCFPQAILDTETECLKETL
THNSQVAPLVKPVARRALEALDQALKGGLAKKVHPLFYSHMSDSNVVQEAYLEQLKGFRP
AATIFEVSTGIHSIKKNAPSVLMMKTKRKLHNNIIEKNVGKVKAAKAAADEDEDSVDEAL
NPEEQAEFRTKRREAREAAEAEEAAVPVIGSKRYLSAADRKKVKKMKLNGENVDVDALWK
EKEAAKAVVSETTDDNAKKFQDEENYIGYIKDTDYAKEEALSRGADGGRGNAFAQARLED
AMLDVNPDEAVAMNNKRRLLHWDVRKKKFIKTTVGELKNGTIKKRNDGTQLSSKKQKVGE
TYKKWQQKQHKRTNIIGAEEEEQGSGRKLDYRNGKKPAGMPRVNKYAKSELLGENAIRKE
EKRKARSSGDKTKMDKFKPKPKRGRGNVPGKTHGAPTKSKLIIRRK
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacaacacggacaagaagaacaagtcgggcggcttccaggcgctgggcttgagc
ccgccgatcttcaaggccgtcatggccatgggctacaaggtgcccacgccgatccagcgc
aagtcgctgccgcacgtgctctcgggcaaggacgtggtcgcgatggcgcggacgggctcg
ggtaagacggcggcgttcttgatcccgatgctcgagaagctcaaggagcacagcaagaag
attggcgtccgcgcgctcattttatcgccgacgcgcgagctcgcggtgcaaaccatcaag
tttgccaagagcttggccaagttcaccgacatcaagtgcggcctcatcgtcggtggcgac
tcgcttgagcagcagttcgagcttctcggcaccaaccctgacgtgctggtcgcgacgccc
ggtcgtctcatgcacctgctccaggaaattccggaattcacgctcgccgccatggagtac
gtgtgtttcgacgaagccgatcgtcttttcgaaatggggtttgccgagcagctccaggaa
attctcacgagcatgcccgcgtcgcgccagacgctcctcttctcggccacgctgccgcaa
gcgctcgtccagtttgcgcgcgccggcctcacggagcccgagctcattcgtttggacgtc
gagtcgcagatctcggaccagctcaagatctcgttctttacgatgcgcaccgaagacaag
ccatccgcgcttgtctacctcctgcgcgatgtcattccgtcgacggagcagacgatcgtg
tttgcggcgacgcgccaccacgtcgagttccttcacgagctcctcctctcgtgccacatc
gactcgagctgcgtgtacggtgacatggaccagacctcgcgcaagatcaacattggcaag
ttccgtgccaagaagacgccgatcctcatcgtgacggacgtggccgcgcgtggtatcgat
atcccgctcctcaacaacgtgctcaactactcgttcccgtcgacgcccaagctctttgtg
catcgcgtcggtcgtgcggcacgtgcgggtcgcagcggtatggccttcaactttgtcgac
ccggacgagatgccgtacatggtcgacttgcatctcttcctcggccggcgccttgaggac
acgtgccccgcggatgtgccggggtacacgctcgccgacatgacggtcgaccaagtacac
tatgggtgcttcccgcaggcgattctggacacggaaaccgagtgcctcaaggagacgctc
acgcacaactcgcaggtcgccccgctcgtcaagccggtcgcgcgccgagccctcgaagct
ctcgatcaagcgctcaaaggaggtttggccaagaaggtgcacccgctcttctacagccac
atgtcggactcgaacgtcgtccaagaagcgtacttggagcagctcaagggctttcgtccg
gcggcgaccatttttgaagtctcgaccggcatccactcgatcaagaagaacgcgccgagc
gtgctcatgatgaagacgaagcgcaagctccacaacaacattatcgaaaagaacgtcggc
aaggtcaaggcggccaaggcggctgcggacgaggacgaagacagcgtcgacgaagcgctc
aaccccgaggagcaggcagagttccgcaccaagcgccgggaagcgcgcgaagccgcggaa
gccgaagaggccgccgtgcccgtcattggctcgaagcggtacctctctgccgcggaccgc
aagaaggtcaagaagatgaagctgaacggcgagaacgtcgacgtcgacgcgctctggaag
gagaaggaggcggccaaggcggtcgtgtccgagacgacggacgacaacgccaagaagttc
caggacgaggaaaactacattggctacatcaaggacacggactatgccaaggaggaggcg
ctcagccgcggcgcggacggcggccgcggcaacgcgtttgcacaggcgcgcctcgaagat
gcgatgctcgatgtcaacccggacgaggccgtcgcgatgaacaacaagcgccgcctcttg
cattgggatgtgcgcaagaagaagtttatcaagacgacggtcggcgagctcaagaacggg
acgatcaagaagcgcaacgacggcacgcagctctcgagcaagaagcaaaaggtcggcgag
acgtacaagaagtggcagcagaagcagcacaagcgcaccaacatcatcggcgccgaagag
gaggagcaagggtcgggccggaagctcgattaccgcaacggcaagaagcctgcgggcatg
ccgcgcgtcaacaagtacgccaagtcggagctccttggcgaaaacgcgatccgcaaggag
gagaagcgcaaggcgcggtcgagcggcgacaagaccaagatggacaagttcaagcccaag
cccaagcgcggccgcggcaacgtgcctggcaagacccacggcgcgccgaccaagagcaaa
ctcattattcgtcgcaagtaa
DBGET
integrated database retrieval system
