KEGG   Saprolegnia parasitica: SPRG_14110
Entry
SPRG_14110        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K14571  ribosome biogenesis ATPase
Organism
spar  Saprolegnia parasitica
Pathway
spar03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SPRG_14110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spar03009]
    SPRG_14110
Ribosome biogenesis [BR:spar03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    SPRG_14110
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N AAA_16 AAA_5 AAA_22 AAA_33 AAA_2 TIP49 AAA_14 AAA_28 Mg_chelatase RNA_helicase nSTAND3 AAA_25 IstB_IS21 Parvo_NS1 ABC_tran AAA_18 NACHT AAA_24 ATP-synt_ab Zeta_toxin TsaE NB-ARC Sigma54_activat ATPase_2 AAA_17 Sigma54_activ_2 AAA_3 AAA_7 Vps4_C AAA_11 DUF5906 Rad17 DUF815 Viral_helicase1 SLFN-g3_helicase CPT
Other DBs
NCBI-GeneID: 24135937
NCBI-ProteinID: XP_012208368
UniProt: A0A067BRJ4
LinkDB
Position
Unknown
AA seq 610 aa
MAAVANDNFIVSRPTTRYSDVGGIQAILKEVQELIEYPLTHPEIYTHLGVEPPRGILLHG
PPGTGKTMLANAIAGESGACFLKVSAPEIVSGMSGESEQKVRDLFDQAIANAPSIIFIDE
IDAITPKRETSSRGMEKRIVAQLLTSTDTLSLANTGGKPVLVIGATNRPNDLDQALRRAG
RFDREICLGIPDADAREKILSVLASKMRLSGDIDFKDLARRTPGYVGADLVSLTKEAAVL
AVNRVFSTLLHKETTTTTTSINDEIRSVAPFTPEELEPLSVNMDDFLQAVPKVQPSSKRE
GFATIPDVTWNDVGALVEVRAELVLSILHPLQHPERFEALGLKMPAGVLLYGPPGCGKTM
LAKAIANESGANFISVKGPELLDKYVGESERAVRQVFERARASSPCIVFFDELDALCPRR
GMSDGGNGVSERVVNQLLTEMDGLDARKNVVVIAATNRPDIIDPAMLRPGRLDKLLYVPL
PHAAERFQILSTLSEKCKMDPALDLEAIARDPRCDSFSGADLSALVREAGVAVLREADQT
HIEIGLCIQKKHFESAFQTVFPSVSRADQKIFEKMKKNLRKSRATLTSTETAPAPIDDDQ
SVTANEAAAL
NT seq 1833 nt   +upstreamnt  +downstreamnt
atggcggcggtcgccaacgacaactttatcgtgtcccgacccacgacgcgttactcggac
gtcggcgggatccaagcgatcctcaaggaagtccaggagctcatcgagtacccgctcacg
caccccgagatctacacgcatctcggcgtcgagccgccgcgcggtatcctcctccacggg
ccgccgggcacgggcaagacgatgctggccaatgcgatcgcaggcgaaagcggcgcgtgc
tttctcaaggtgagcgccccggagatcgtgtcgggcatgtcgggcgagtcggagcagaag
gtccgggacctctttgaccaagcgattgcgaacgcgccgtccatcatcttcatcgacgag
atcgatgcgatcacgcccaagcgcgagacgtcgtcgcgcggcatggagaagcgcatcgtc
gcgcagctgctcacgagtaccgacacgctgagcctcgccaacacgggcgggaagcccgtg
cttgtgattggcgcgaccaaccgcccgaacgatttggaccaggcgctgcgccgggccggg
cgctttgaccgcgaaatctgcctcgggatcccggacgccgacgcgcgcgagaagatcctc
tcggtgctcgcatccaaaatgcgtctctcgggcgacattgatttcaaagacctcgcgcgc
cggacgcccggctacgtcggcgccgacttggtctcgctcacaaaggaagctgccgtgctc
gccgtcaaccgtgtcttctcgacgcttctgcacaaggagacgacgacgacgacgacctcg
atcaacgacgagatccggtcggttgcgccgtttacgcccgaagaactcgaacccttgagc
gtcaacatggacgactttcttcaagccgtgcccaaggtgcagccgagctcgaagcgcgaa
ggctttgcgacgatcccggacgtcacgtggaacgatgtcggcgcgctcgtcgaggtccgc
gccgagctcgtgctctcgattctgcacccgctccagcaccccgagcgctttgaagccctc
gggctcaagatgcctgccggtgtgcttctctacggcccgcccggttgcggcaagacgatg
ctggccaaagcgatcgcgaacgagagcggcgccaactttatctcggtcaagggaccggag
ctcctcgacaagtacgtgggcgagtcggagcgcgcggtgcgccaagtgtttgagcgcgcg
cgcgcatcgtcgccgtgcattgtgttctttgacgagctcgacgcgttgtgcccgcgccgc
ggcatgagcgacggcggcaacggcgtcagcgagcgcgtcgtcaaccaactgctcacggaa
atggacggcttggacgcgcgcaagaacgtggtcgtgatcgccgcgacgaaccgcccggac
atcattgacccggccatgctgcgccccggtcgcctcgacaagctgctctacgtgccgctg
ccgcacgccgcagagcgcttccagatcctctcgacgctgagcgaaaagtgcaagatggac
ccggcgctcgatttggaggcgatcgcgcgcgacccgcgctgcgacagcttctcgggggca
gacctcagcgccctcgtgcgcgaagccggcgttgccgtgctccgcgaggccgaccagacg
cacatcgagatcgggctgtgcatccagaagaagcactttgagtcggcgttccagacggtc
ttcccgtccgtctcgcgcgccgatcaaaagatctttgagaaaatgaagaagaatctgcgc
aagtcgcgcgcgacgctcacgagcacagagacggcgcccgcgccgatcgacgacgaccaa
agcgtcacggccaacgaagccgcggccttgtaa

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