Saprolegnia parasitica: SPRG_16972
Help
Entry
SPRG_16972 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
spar
Saprolegnia parasitica
Pathway
spar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SPRG_16972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spar03021
]
SPRG_16972
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_16972
Transcription machinery [BR:
spar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
SPRG_16972
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
SPRG_16972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCCH_2
Torus
zf-CCCH_4
zf-CCCH_3
Zn_finger_prot
Motif
Other DBs
NCBI-GeneID:
24138546
NCBI-ProteinID:
XP_012211824
UniProt:
A0A067BL61
LinkDB
All DBs
Position
Unknown
AA seq
202 aa
AA seq
DB search
MPGTIWIDDEEALVFDFEAALPALLAAASTALPQDEDAKKDFKRGTVVCRHWLRGLCMKG
DNCEFLHQFDMSKMPECRWGMECQVPECPFRHVPDEDRMECAFYKQGFCSHGSACRYRHV
KLPRDECPVIADFGLQSKAAEEESAKRRKTQPVNEFFKIAICKHWEKQGTCPFGDECHFA
HGEKELRPFPKDAGKGDHHHGG
NT seq
607 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggacgatctggatcgacgacgaggaagcgcttgtcttcgacttcgaggccgcg
ctgcctgcgctcctcgccgctgcttcgacggcgctgccgcaggacgaagatgcgaagaag
gactttaagcgaggtacagtcgtctgccggcattggctgcgcggcctctgcatgaagggc
gacaactgcgagtttctgcatcagttcgatatgtccaagatgcccgagtgtcgatggggc
atggagtgccaagtgcccgagtgtcccttccgccacgtgcccgacgaggaccgcatggag
tgcgcgttctacaagcaaggcttttgctcccatggcagcgcgtgccggtaccgccacgtc
aagctgccgcgcgacgagtgccccgtcatcgccgactttggcctccagagcaaggccgcc
gaagaagagagcgccaagcgccgcaagacacagcccgtgaacgagttcttcaagatcgcg
atctgcaagcactgggagaagcagggtacatgtccgtttggcgacgagtgccatttcgcc
cacggcgagaaggagctgcggccgttccccaaggatgcggggaagggcgaccaccaccat
ggcggcg
DBGET
integrated database retrieval system