Sphingomonas paucimobilis: DRN02_005500
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Entry
DRN02_005500 CDS
T06034
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
spau
Sphingomonas paucimobilis
Brite
KEGG Orthology (KO) [BR:
spau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spau03400
]
DRN02_005500
Enzymes [BR:
spau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DRN02_005500
DNA repair and recombination proteins [BR:
spau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DRN02_005500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QBE91536
LinkDB
All DBs
Position
complement(1173301..1176255)
Genome browser
AA seq
984 aa
AA seq
DB search
MAEPRRPRLHTIPAHRGFADALVAGLMRRTGGDPLTLAQGMILLPTNRGVRAVTEAFVRA
SGGGLILPRMVALGDPELGEAAGSALDPADAEAPPPPAIAPSARRMILARLVEEERKRAG
QPVTAAEAVRLAGDLARTLDQMLIEEVEPAELAALDLGPELTEHWQAALQTFSVVLDRWP
AILARMGRIDAARRRTLLFDRIVTRWRDQPPAGFVCAAGVTDTAPAVARVLRCVSEMPGG
SVVFAGLDLTMPAEEWDALGPHKPDPVTGRIRRSIETHPQYALKLLLDRMGVGRDEVTIW
RGGGDYDAGAARGRAIANAMAPADFTGKWTDLPAEDRRLSGVSTIELATPAEEAQAIALA
LREAVEEPGRTAALVTPDRALARRVAAHCRRWNILIDDTAGRPLSILLPGTFLLQLAEAA
AQHFAPLPLLALLKHPLIHGDMERVDWLDGVRSLDRGLRGPRPAPGLDGIAAHIADRPTA
AGFWAKVAPMLQPVGRTFGDGAQTLRGLLACLRECGQALCGDALWTGPAGRAAAEFLSGY
EEQADHGPVRIDPADLPGLMRSLLDEIAVRAIPREGQHPRLAIYGPIEARLQTADLMIAA
GLNEGVWPGRPAPDPWLAPRIRAQLGLVGLEQRIGIAAHDLAQAMGAPRAILTRARRDAS
GPTLASRFWLRLQAMAGERFEGHPTLAAWAERLDRPDAYTPVDRPAPKPPARLRPTVISV
TEVDRLKADPYAFYARRVLRLTPLDPVDADPSAAWRGTAVHDILEAWWKEDACAVEALRP
RALAMLRDQRTHPMMRALWQPRLIEAIDWIAAEVAAKAAEGRHVLSAEGKGEAKLAGVTL
TGRFDRIDRTPDGGLVVIDYKTGKPPSAVAVREGFSLQLGLLGLIAERGGFEGVAGKAGG
FEYWSLGRSREGLGYIATPVDPEGKRDRIRTDEFVAIAAANFADAAGQWLTGDAPFTAKL
VPEYAPYAEYDQLMRRDEWYGRDR
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggctgagccgcgccgcccccgccttcataccattcctgcccatcgcggtttcgccgac
gcgctggtcgccgggttgatgcgccgtaccgggggcgatccgctgacgctggcacagggg
atgatcctgctgccgaccaatcgcggcgtgcgcgcggtgaccgaggcgttcgtgcgcgcg
agcggcggcgggctgatcctgccgcgcatggtggcgctgggcgatcccgaactgggtgag
gcggcgggctcggcgctcgaccccgccgatgccgaagccccgccgccgcccgccatcgcc
ccgtcggcgcggcgcatgatcctggcacggcttgtcgaggaggagcgcaagcgcgccggc
cagccggtgacggcggccgaggcggtgcgactggcgggcgatctggcgcgcacgctcgat
cagatgctgatcgaggaagtcgagcccgccgagctcgccgcgcttgatctgggccccgag
ctgaccgagcattggcaggccgcgctccagaccttttcggtcgtgctcgatcgctggccc
gccatattagcgcgcatggggcggatcgatgcggcgcggcggcggacattgctgttcgac
cggatcgtcacccgctggcgcgaccagccgcccgccggcttcgtctgtgccgccggcgtc
accgataccgcgcccgccgtcgcgcgggtgctgcgctgcgtgtcggaaatgccgggtggc
tcggtggtgttcgccgggctcgacctgaccatgcctgccgaggaatgggacgcgctgggg
ccgcacaagcccgatcccgtgacgggtcgcatccgccgatcgatcgagactcatccgcaa
tatgcgctgaagctgttgctcgaccgcatgggggtcgggcgcgatgaggtgaccatatgg
cgcggcggcggcgattatgatgcgggggcggcgcgcggacgggccatcgccaatgccatg
gccccggccgacttcactggcaaatggaccgacctgcccgccgaggatcggcggctgtcg
ggcgtgtccacgatcgaactcgccacccctgccgaggaagcgcaggctatcgcgctggct
ctgcgggaagccgtggaggagcccgggcgcaccgccgcgctggtgacccccgaccgcgcg
ctggcccggcgggtggcggcgcattgccgacgctggaacatcttgatcgacgatacggcg
gggcggcccttgtcgatcctgctgccgggcactttcctgctgcaactggccgaggcggcg
gcacagcatttcgcgcccttgccgctgctcgcactcctcaagcatccactgatccatggc
gatatggagcgggttgactggctcgatggagtccgctcgctcgatcgcggattgcggggg
ccgcgaccggcgccggggctggacggcatcgccgcgcatatcgccgaccgtcccaccgcc
gccggcttctgggccaaggtcgcgccgatgctccagccggtcggccggacgttcggcgat
ggtgcgcagacattgcgcgggctgctcgcctgtctgcgcgagtgcgggcaggcgctatgc
ggtgatgcgctgtggaccgggccggcggggcgcgcggcggccgaattcctgtcgggctat
gaggagcaggccgatcacggcccggtgcggatcgatcccgccgatctgcccggcctgatg
cgcagcctgctcgacgagatcgcggtgcgggccatcccgcgcgaaggccagcatccgcgt
ctcgccatctacgggccgatcgaggcgcgtctccagaccgccgacctgatgatcgcggcg
ggcttgaacgaaggggtatggcccggccgacccgcgcccgacccctggctcgcgccgcgt
atccgggcgcaactggggctggtcgggcttgagcagcggatcggcatcgccgcgcacgat
ctggcgcaggcgatgggggcgccgcgcgcgatcctgacgcgtgcgcgccgcgatgccagt
ggcccgacgctcgcctcgcgcttctggttgcggcttcaggccatggcgggggagcggttt
gaggggcatccgacgctggcggcgtgggcggagcggctcgaccggccggatgcgtacacg
cccgtcgatcggcccgcgcccaagccgcccgcgcgcctgcgccccaccgttatttcggtg
accgaggtcgaccggttgaaggccgacccttatgccttctacgcccggcgcgtgttgcgc
ctgaccccgctcgatcccgtcgatgccgatcccagcgcggcgtggcgcggcaccgccgtc
catgacattctggaagcgtggtggaaggaagatgcgtgcgcggtcgaggcgctgcgcccc
cgcgcgctggccatgctgcgcgaccagcggacccatccgatgatgcgcgcgctgtggcag
ccccggttgatcgaggcgatcgactggatcgccgcagaggtcgccgccaaggccgccgaa
gggcgccatgtgctgagcgcggagggcaagggagaggcgaagctggcgggtgtgacgctg
accggccggttcgatcggatcgaccgcaccccggacggtgggctggtggtgatcgactat
aagaccggcaagccgccctccgccgttgcggtgcgtgaggggttcagcctgcaactcggt
ctcctgggcctgatcgccgaacggggtggattcgagggcgtggcgggcaaggcgggcggt
ttcgaatattggtcgctgggtcgtagccgcgaaggcctgggctatatcgccaccccggtc
gatcccgagggcaagcgcgaccgcatccgcaccgacgaattcgtggcgatcgcggcggcg
aactttgccgatgcggcggggcagtggttgacgggcgatgcgccgtttacagccaagctg
gtgcccgaatatgcgccctacgcggaatatgatcagctgatgcggcgggatgaatggtat
ggccgtgatcggtaa
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