Shewanella putrefaciens CN-32: Sputcn32_0399
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Entry
Sputcn32_0399 CDS
T00513
Name
(GenBank) pseudouridine synthase Rlu family protein, TIGR01621
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
spc
Shewanella putrefaciens CN-32
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spc03009
]
Sputcn32_0399
03016 Transfer RNA biogenesis [BR:
spc03016
]
Sputcn32_0399
Enzymes [BR:
spc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
Sputcn32_0399
5.4.99.29 23S rRNA pseudouridine746 synthase
Sputcn32_0399
Ribosome biogenesis [BR:
spc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sputcn32_0399
Transfer RNA biogenesis [BR:
spc03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
Sputcn32_0399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ABP74131
UniProt:
A4Y2E8
LinkDB
All DBs
Position
432674..433363
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AA seq
229 aa
AA seq
DB search
MYQIIADEADFLVISKFPKVHFHSQDGTVGVVAQVEQDLGIKLFAVHRLDTPTSGLLILA
KSTAAAKQFTELFTAHKVQKYYLALAKGKPKKKQGWVIGDMAKSRRSMFKLLRTKENPAI
TQFFSVSVGDGLRLYLLKPHSGKTHQLRVALASLGVPILGDELYGGAVADRCYLHAYCLH
FRYQDAVTGWRDYTYLNIPQQGEAFQLEAVSDALALWHKPETLAWPSKE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaaatcatagctgatgaggctgattttcttgttatttcaaaatttcctaaggtg
cactttcatagtcaagatggcaccgtgggtgtagtagcacaggttgagcaagatttaggg
attaagctttttgctgtgcatcgactcgatacgcccacatctggtctattgattctggct
aagagtactgccgcggcaaaacaatttactgagctatttaccgcccataaagtgcagaaa
tattacctcgccctcgcaaaaggtaagccgaaaaagaaacaaggctgggtaattggtgat
atggcaaagtcacgccgtagtatgtttaagctgttgcgaactaaagaaaaccctgccatc
acccaatttttttcagtcagtgtcggagatggattgcgactttatcttctcaaaccccat
tcgggaaaaacccatcaattgcgagtggcattggcaagcttaggtgtaccgattttaggc
gatgaattatatggtggtgctgtggctgaccgttgctatttacacgcttattgcctgcat
ttccgctatcaggatgcggtaactggttggcgggattatacctatctgaatataccacag
cagggcgaagcttttcagttagaggctgtaagtgacgcgctggctctttggcataagcca
gagactctggcatggccctctaaggagtag
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