Streptococcus pneumoniae D39 (virulent serotype 2): SPD_0329
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Entry
SPD_0329 CDS
T00413
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase, putative
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
spd
Streptococcus pneumoniae D39 (virulent serotype 2)
Pathway
spd00521
Streptomycin biosynthesis
spd00523
Polyketide sugar unit biosynthesis
spd00541
O-Antigen nucleotide sugar biosynthesis
spd01100
Metabolic pathways
spd01110
Biosynthesis of secondary metabolites
spd01250
Biosynthesis of nucleotide sugars
Module
spd_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
spd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SPD_0329 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SPD_0329 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SPD_0329 (rfbC)
Enzymes [BR:
spd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SPD_0329 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ABJ55481
UniProt:
Q9ZIH5
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All DBs
Position
328664..329257
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AA seq
197 aa
AA seq
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MTDNFFGKILAVRKIDAIPGMLEFDIPVHGDNRGWFKENFQKEKMEPLGFPESFFAEGKL
QNNVSFSRKNVLRGLHAEPWDKYISVADGGKVLGSWVDLREGETFGNTYQTIIDASKGIF
VPRGVANGFQVLSDTVSYSYLVNDYWALELKPKYAFVNYADPSLGIEWENIAEAEVSEAD
KHHPLLKDVKPLKKEDL
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgacagataattttttcggaaaaatacttgcggtgcgtaaaattgatgccattccaggt
atgttagagtttgatatcccagttcatggtgacaatcgtggctggtttaaggaaaatttc
cagaaggaaaagatggagccacttggctttcctgaaagcttctttgctgaagggaaacta
caaaataacgtcagcttttctcgcaaaaatgtccttcgaggcctccacgcagagccttgg
gataagtacatctctgtagcagatggagggaaagttctgggttcttgggttgatctacgc
gagggtgaaacctttgggaatacctatcagacaataattgatgcaagcaagggaatcttt
gttcctcgaggcgtagctaatggcttccaagttttatcagatacagtgtcatatagctat
ctggtcaatgattattgggctcttgaactcaaacccaagtatgcctttgtgaactacgct
gatccaagccttggtattgaatgggaaaatattgcagaagcagaggtttcagaagcagat
aaacatcatcccctacttaaggatgtaaaacctttgaaaaaagaagatttgtaa
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