Solanum pennellii: 107002235
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Entry
107002235 CDS
T04130
Name
(RefSeq) coatomer subunit beta-1
KO
K17301
coatomer subunit beta
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107002235
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107002235
Membrane trafficking [BR:
spen04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
107002235
Exosome [BR:
spen04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
107002235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
HEAT
Coatomer_g_Cpla
Alpha_adaptinC2
Motif
Other DBs
NCBI-GeneID:
107002235
NCBI-ProteinID:
XP_015055655
LinkDB
All DBs
Position
10:complement(79749688..79757348)
Genome browser
AA seq
948 aa
AA seq
DB search
MEKSCSLLIHFDKGTPALANEIKEALEGSDVTAKVDAMKKAVMLLLNGETLPQLFITIIR
YVLPSEDHTIQKLLLLYLEIIEKTDSKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL
CRLNEVDIIEPLIPSIMSNLEHRHPYVRRNAILAVMAVYKLPQGEQLLADAPEKIENILT
TEQDPSAKRNAFLMLFQCAQERAINYLLTHVDRVSDWGDLLQMVVLDLVRKVCRTNKGEK
GKYIKIIISLLNAPSAAVVYECAGTLVSLSSAPTAIRAAANTYCQLLQSQSDNNVKLIVL
DRLNELKSSHREIMVDMIMDVLRALSSPNLDIRRKTLDIVLELITPRNINEVVLTLKKEV
MKTQSGELEKNGEYRQMLIQAIHSCAVKFPEVASTVVHLLMDFLGDNNVASAIDVVVFVR
EIIETNPKLRVSIVTRLLDTFYQIRAARVCSCALWIIGEYCISLSEVESGIATIKQCLGD
LPFYSASEEGEANDSSKKSQQVNSTTVSSRRPAVLADGTYATQSAASETAFSPPTVVQGS
LTAGNLRSLLLTGDFFLGAVVACTLTKLILRLEEVQPSKVEVNKTTTNALLIIVSMIQLG
QSSALPHPIDNDSYDRMVLCVRLLCNTGNEVRKIWLNSCHESFVKMLSDKQMRETEEIKA
KAQISHSQPDDLIDFYHLKSRRGMSQLELEDAVQDDLKRATGEFVKDETDANKLNRVLQL
TGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYTLAP
ESSKQIKANIKVSSTETGVIFGNIVYETSNVFDRMVVVLNDIHIDIMDYISPAVCSDAAF
RTMWAEFEWENKVAVNTVIQDEKDFLDHIIKSTNMKCLTALSALEGECGFLAANLYAKSV
FGEDALVNVSIEKQADSKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcctgttctttgctgatacactttgataagggcactccagctcttgccaat
gagatcaaggaagctcttgaagggagcgacgttactgccaaggttgatgccatgaagaaa
gctgtcatgcttttgttgaatggtgaaactctacctcaactgtttattactattattaga
tatgtcttgccctctgaagatcacacgattcaaaagctgctgcttttgtatttggagatt
atcgagaagaccgattctaaggggcgtgtacttcctgaaatgatcctaatttgtcagaac
ttgaggaataatttgcagcatccaaatgagtacattcgtggagttactttgagattcctt
tgccggctaaatgaggttgatataattgaacctctgattccatctattatgagcaacttg
gagcaccggcatccatatgttcgccggaatgcaatacttgctgtgatggctgtttacaag
cttccacagggcgagcagctcctggcagatgcaccagaaaagattgagaacattcttacc
acagagcaggatccatcagctaaaaggaatgcatttctgatgcttttccaatgtgctcag
gaacgtgctatcaattacctcttgacccatgttgatagagtatctgattggggtgactta
cttcaaatggttgtcttggatttggtccgaaaagtttgcaggacaaacaaaggggagaaa
gggaagtacatcaagataattatatcactgctcaatgccccttctgctgctgttgtctat
gaatgtgctggaactcttgtttctttgtcttctgccccaactgctataagagctgcagcc
aatacctattgtcaacttctacagtctcagagtgacaacaatgtgaagcttatcgtgctt
gatagacttaatgaattgaaatcttctcatagggagatcatggttgatatgataatggat
gtcctcagagcgctctcaagccctaatcttgacatcaggagaaaaacacttgacattgtt
cttgagttgatcaccccccggaatatcaacgaggtcgttctcacacttaagaaagaagtc
atgaaaacccagagcggtgaacttgagaagaatggtgagtaccgtcaaatgcttatccaa
gccattcattcatgtgctgttaagtttccagaagttgcaagcacagttgtccatctgttg
atggacttcttgggagacaacaatgtcgcttctgcaattgatgtggttgtttttgtccgt
gagataattgaaacaaatccaaaattaagggtttccattgttacaaggctactggatact
ttctaccagattcgtgctgcacgtgtttgttcatgtgccctttggattattggagagtat
tgtatatctctttctgaagttgagagtggcattgcaactatcaaacagtgccttggagac
ctaccattttattcagcttctgaagaaggtgaagctaatgattcttcgaaaaagtctcaa
caagtaaactccactactgtttcatctagaagacctgctgtccttgctgatgggacatac
gctactcaaagtgctgcctctgaaaccgctttttcaccccctacagtagttcaaggatct
ttgactgctggaaatctgagatccctcctgctaactggtgatttcttccttggggcagtt
gttgcttgcaccctaactaagctcattttgagattggaagaagtccaaccatccaaagtt
gaagtgaacaaaacaacaactaatgctttactgatcattgtctcaatgatacagctaggg
cagtcttcagctcttccacacccaattgataatgattcctatgataggatggttctgtgt
gtaagattgctatgtaacactggcaatgaggtccggaagatctggttgaattcttgccat
gaaagttttgttaaaatgctttctgataagcagatgcgagagacagaagagatcaaagca
aaggctcaaatttctcattctcagcctgatgacctcattgatttctaccatttgaagagc
aggaggggcatgagtcagctggagttggaagatgcagtccaagatgatttgaagcgtgcc
actggagaatttgtcaaagatgagacagatgctaataaactaaaccgggttctgcaacta
acaggatttagcgaccctgtttatgcggaagcatatgtgacagttcatcattatgatatt
gtcctggatgtgacagttattaatagaactaaagagaccctccagaatttatgtttggaa
ttggcaactatgggtgatcttaaacttgttgagcgtccacagaattatactctagctcct
gagtcgagcaaacagataaaagcaaacatcaaggtgtcctcaactgagactggcgtcatt
tttgggaacattgtttatgagacatcgaatgtgtttgaccggatggtggttgtgctaaat
gacattcatattgacatcatggattatatatcccctgcagtgtgcagtgatgctgctttt
agaaccatgtgggcagaatttgagtgggaaaacaaggttgctgtcaacactgtcattcaa
gatgaaaaagattttcttgaccatataatcaaatcaaccaacatgaagtgccttactgcg
ctgtctgctttggaaggggaatgcgggtttctcgctgctaacttgtatgcaaagagcgtg
tttggcgaggatgctttggtgaatgtaagcattgagaaacaagcagatagtaagctgagt
ggctacattaggataaggagcaaaacccaaggaattgctcttagcttgggagacaagata
acactcaagcagaagggaggcagttga
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