KEGG   Solanum pennellii: 107004126
Entry
107004126         CDS       T04130                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH-like
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
spen  Solanum pennellii
Pathway
spen03082  ATP-dependent chromatin remodeling
spen03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    107004126
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    107004126
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:spen01009]
    107004126
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spen03021]
    107004126
   03036 Chromosome and associated proteins [BR:spen03036]
    107004126
Protein phosphatases and associated proteins [BR:spen01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     107004126
Transcription machinery [BR:spen03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     107004126
    SWI/SNF complex
     107004126
Chromosome and associated proteins [BR:spen03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    107004126
   PBAF complex
    107004126
   SWI/SNF complex
    107004126
SSDB
Motif
Pfam: SNF5
Other DBs
NCBI-GeneID: 107004126
NCBI-ProteinID: XP_015057845
LinkDB
Position
11:7638370..7654247
AA seq 242 aa
MMKPPSASGSPKNPVKFRLPTAENLVPIRLDIEIDGKRFKDAFTWNASDPDSEVFAFARR
TVKDLKLPTAFATQIAQSIQSQLIEFRSYEGQDMHTGEKVVPIKLDLRVNQTVIKDQFLW
DMNNFEGDPEEFARTFCEDMKIEDPEVGPAIAIAIREQLYEIAKQGVASMRESRTNKKGR
KGMEHLSASKVGSPALDLGKLFDPEGSIQRKMSERDAYGPVVSQLSKEEVDALEAREERL
PR
NT seq 729 nt   +upstreamnt  +downstreamnt
atgatgaaacccccttcggcatcgggttcaccgaagaacccagtgaagttcagacttcca
acagccgagaatcttgtacctatccgtcttgacatcgaaattgatggtaaaagatttaaa
gatgcttttacttggaacgcaagtgatcctgactcagaggtgtttgcgtttgcgaggaga
actgtgaaggatttgaaacttcctactgcttttgccactcagattgctcaatccatccag
tcacaattgatagaatttcggtcatacgaaggacaagatatgcacactggcgagaaagtt
gttcctatcaagcttgatctccgagtaaatcagacagttataaaggaccagtttttatgg
gacatgaacaattttgagggtgatcctgaagaatttgcacggacattttgtgaagatatg
aaaattgaagacccagaagttggacctgcaattgccatagcaattagagaacaactttat
gagattgcgaagcaaggtgttgcatccatgagagaaagcaggacaaataagaaaggacgc
aaaggaatggaacacctctcagccagtaaagtaggttcgcctgcactggacctggggaag
ctattcgaccctgaaggaagtatccaacggaaaatgagtgaacgcgatgcatatggacca
gtagtcagtcagctgtcaaaggaagaggtggatgccctcgaggctagagaagagaggctt
cctcggtga

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