Solanum pennellii: 107004126
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Entry
107004126 CDS
T04130
Name
(RefSeq) chromatin structure-remodeling complex protein BSH-like
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
spen
Solanum pennellii
Pathway
spen03082
ATP-dependent chromatin remodeling
spen03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107004126
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107004126
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spen01009
]
107004126
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107004126
03036 Chromosome and associated proteins [BR:
spen03036
]
107004126
Protein phosphatases and associated proteins [BR:
spen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107004126
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107004126
SWI/SNF complex
107004126
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107004126
PBAF complex
107004126
SWI/SNF complex
107004126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
107004126
NCBI-ProteinID:
XP_015057845
LinkDB
All DBs
Position
11:7638370..7654247
Genome browser
AA seq
242 aa
AA seq
DB search
MMKPPSASGSPKNPVKFRLPTAENLVPIRLDIEIDGKRFKDAFTWNASDPDSEVFAFARR
TVKDLKLPTAFATQIAQSIQSQLIEFRSYEGQDMHTGEKVVPIKLDLRVNQTVIKDQFLW
DMNNFEGDPEEFARTFCEDMKIEDPEVGPAIAIAIREQLYEIAKQGVASMRESRTNKKGR
KGMEHLSASKVGSPALDLGKLFDPEGSIQRKMSERDAYGPVVSQLSKEEVDALEAREERL
PR
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacccccttcggcatcgggttcaccgaagaacccagtgaagttcagacttcca
acagccgagaatcttgtacctatccgtcttgacatcgaaattgatggtaaaagatttaaa
gatgcttttacttggaacgcaagtgatcctgactcagaggtgtttgcgtttgcgaggaga
actgtgaaggatttgaaacttcctactgcttttgccactcagattgctcaatccatccag
tcacaattgatagaatttcggtcatacgaaggacaagatatgcacactggcgagaaagtt
gttcctatcaagcttgatctccgagtaaatcagacagttataaaggaccagtttttatgg
gacatgaacaattttgagggtgatcctgaagaatttgcacggacattttgtgaagatatg
aaaattgaagacccagaagttggacctgcaattgccatagcaattagagaacaactttat
gagattgcgaagcaaggtgttgcatccatgagagaaagcaggacaaataagaaaggacgc
aaaggaatggaacacctctcagccagtaaagtaggttcgcctgcactggacctggggaag
ctattcgaccctgaaggaagtatccaacggaaaatgagtgaacgcgatgcatatggacca
gtagtcagtcagctgtcaaaggaagaggtggatgccctcgaggctagagaagagaggctt
cctcggtga
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