Solanum pennellii: 107005867
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Entry
107005867 CDS
T04130
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
spen
Solanum pennellii
Pathway
spen00040
Pentose and glucuronate interconversions
spen01100
Metabolic pathways
Module
spen_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107005867
Enzymes [BR:
spen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
107005867
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
107005867
NCBI-ProteinID:
XP_015060003
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Position
12:916937..919928
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AA seq
409 aa
AA seq
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MDMKIKFVYFGLGVLFLAHFGESQNATFDITKYGATANADISEAVGKAFKEACASTSPST
IVIPKGTFQMNQVKLEGPCKGPIELQIQAILKAPTDPNAIKTGEWLTVNKLDFFTMSGGG
TLDGQGKEAWECKKSKKCTKLPNNLSFNSLTNSIIKDITTLDSKAFHVNVNQCKNITFTK
FNVSAPADSPNTDGIHVARASSVNITESAFSTGDDCISIGDETEQLYITKVTCGPGHGIS
VGSLGGNPGEKPVVGVFVKNCTLVSTDNGVRIKTWPASHPGVVSDIHFEDIIVQNVSNPI
VIDQVYCPSGKCNKDLPSQVKISKVSIQNIKGTSRTHNAVSLTCSKGSPCEGVEVGDVDI
SYSGKEGPAKSSCENIKPTFKGKQTPAICSAGADAPANAPAPAAAAAAS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaaaatcaagtttgtttattttggattgggtgtgttatttctagcacatttt
ggagaatctcaaaatgcaacttttgatataaccaaatatggtgccacagccaatgctgat
attagtgaggctgttggaaaagcttttaaagaggcatgtgcatcaacaagtccaagtaca
atcgtgatcccaaaaggaacatttcaaatgaaccaagtgaaattagaaggaccatgcaaa
ggccctattgaacttcaaattcaagccattttgaaagcaccaacggaccctaatgcaatc
aagactggtgaatggttaacagtcaacaaacttgatttcttcacaatgtctggtggtgga
acacttgatggtcaaggtaaagaagcatgggaatgcaaaaagtcaaaaaagtgcaccaag
cttcccaataatttgagcttcaactccctcacaaattccataatcaaggacataacaaca
ttggatagcaaagcattccatgtgaatgttaaccaatgcaagaacataacattcaccaaa
ttcaatgtcagtgctccggctgatagcccgaacactgatggaatccacgtggcgagagca
agctctgtgaatatcacagagtctgctttctccacgggagatgattgtatctccattggc
gatgaaacggaacaactttacatcactaaagtcacttgtggacctggtcatggtattagt
gttggttcccttggtggaaatcctggtgaaaagccagttgttggtgtttttgttaaaaat
tgcactttagttagcactgataatggtgttaggatcaagacatggcctgcttcacatcct
ggtgttgtatctgatatacattttgaagatatcattgtgcaaaatgttagcaaccctatt
gtcattgatcaagtttattgcccaagtggaaaatgcaacaaagacttgccttcacaagtg
aagattagcaaggtgtctatccaaaacataaaaggtacatcaagaactcataatgcagtc
tcactaacttgtagcaaaggctcaccatgtgaaggtgttgaagttggagatgttgacatt
tcatatagtggtaaagaaggaccagcaaaatcaagttgtgaaaatattaagccaactttt
aagggaaaacaaactccagctatttgttcagctggtgctgatgctcctgctaatgctccc
gctcccgccgcggccgccgcagcttcttaa
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