Solanum pennellii: 107007846
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Entry
107007846 CDS
T04130
Name
(RefSeq) trafficking protein particle complex subunit 8
KO
K20305
trafficking protein particle complex subunit 8
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107007846
Membrane trafficking [BR:
spen04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
107007846
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
DUF6229
Motif
Other DBs
NCBI-GeneID:
107007846
NCBI-ProteinID:
XP_015062141
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Position
1:complement(1793202..1812749)
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AA seq
1273 aa
AA seq
DB search
MDPVNSTLGRMLLDEITPVVMVLRTPFVEESSQKNQLSFIEMLSPFCNFNNIDVPVRTAS
DQPYRLKKFKLRLFYASDIRQPNIEVAKERLNQVITDAGEKDLSNLSSEPLQIESVLNSS
QNEFLPSWFQYFNKELVRTVSFSEHEAFDHPVTCLLAVSSRDEDPINKFVDLFNINQLPS
LLNDGSMDPKMLKHFVLVHDGVEVPLERATKTLAEMRSTFGANCCHLLCINSSKDGSEEH
ENLWSAYKTDISHGQQLRCFLSSDDLDELKKFVQDLSSKHIIPHMEQKIRLLNQQVSATR
KGFRNQIKNLWWRKGKEDAPENPAGPTYTFSSIESQIRVLGDYAFMLHDYELALSNYRLL
STDYKLDKAWKHYAGVQEMMGLTYFILDQSRKDGEYCMENAFTTYLKIGSSGQRNATRCG
LWWVEMLKARDQYKEAASVYFRISGEEPLHSAVMLEQASYCYLFSTPPMLRKYGFHLVLS
GDLYKKCDQIKHAIRTYKCALSVFKGTTWRHIRDHVHFHIGKWYGFLGIFDVAIKNMLEV
LACGHQSKTTQELFLKDFLQIIQQTGKTYEVPKLQLPVINIPSVKVVYEDHRTYASQAAV
HVKESLWRSLEEDMIPTLSSKSNWLELQSKMLPKKLRESNICVAGEAIGITIEFKNPLQI
PISISGVTLNCEHSPAVSEPNANNSIGEQNGETSNKSATSGNCASDTSSFTLSEADVALG
EGETVLVQLTVTPRAEGTLKIVGIRWKLSGSLGGFCTFDSDLVRKKVMKGNRKSKRSTFD
NLKFLVIKSLPKLEGFIHHLPETVYVGDLRCIALELKNPSKIPIKKLKMKVSPPRFLQIG
HKEDLEVQFPACLERKSSKQRSLRSKTDKVSDDIFSFPEDTSIADGTPISWPLWLRAAAP
GKISLYLSVYYEMGDISSVMTYRILRVHFNIEVLPSLDVSFQISPRPSRLQEFLVQMDVV
NRSSSKGFQVHQLSSVGDEWEISLLEPTKVLPSDFLLAGQAISWFLKLKNCRSVTDQDSA
SSLCPSVKADVNLLCGSEMVFDLYSSPLSEFHHYERVHQRISDQEHEDTVDFILVSRSQC
EENDRANIFSHHICHRSVRTSSPIRWIIDGPRTVKRDFKEPFYAITLKMIVHNSSDDVVS
IRCNPSDSAVNISSSGTTSAASGNEVGWHDLSLSNDIKITPDTPGTRVVKPMSSDPVPSF
IWSASSSTHFTLDPLSSRETPMEICVFSPGTFDLSNYSLHWSLSSPSDQRDESRASSGTC
QGHPFYITVLQQD
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggatccggtgaactcaacacttggccgaatgctattggatgagatcactcctgtggtt
atggttctccgaactccttttgttgaagaatcttctcagaagaatcaactctccttcatt
gaaatgctttctccgttctgcaatttcaacaatatcgacgtgccagttcgaactgctagt
gatcagccttacagactgaagaagttcaaattgcggttgttttatgcttcagatatacgg
cagcctaatatcgaggttgcaaaggagcggttaaaccaagttatcactgatgctggagag
aaagatctttctaacttatcttcagaacctctgcaaattgagagtgtgctcaactcttct
caaaacgagttcctaccgtcatggttccagtatttcaacaaagagctagtacgtacggtc
tctttttcagaacatgaagcttttgaccatcctgtgacatgtcttttggctgtttcttca
cgggatgaagatcctatcaacaaatttgttgacctattcaacatcaatcagttgccttcc
ctacttaatgatggttcaatggatccaaaaatgctaaagcattttgtattggtacacgat
ggtgtggaagttcctttagaaagagcaaccaaaaccttggcagagatgaggagcactttt
ggggctaattgttgtcatttgctgtgtattaactcctctaaggatggctcagaagagcat
gaaaacctatggtctgcttataaaactgatatttcacatggccagcagctacgttgcttc
cttagctcagatgacttggatgagctgaaaaaatttgtacaagatctatcgtctaaacat
attattcctcatatggagcaaaaaattcgtctgcttaaccagcaggtttctgcaactagg
aaaggttttagaaaccaaataaaaaacttgtggtggagaaagggtaaagaagatgcacca
gaaaacccagctggtccaacgtatactttcagctccattgaatcacaaataagagttttg
ggtgattatgccttcatgttacatgattatgagcttgcattgtctaactatcgtctactt
tctaccgactacaagctcgacaaagcttggaaacactatgctggtgttcaggaaatgatg
gggctgacctacttcattttggatcagtcgagaaaggatggtgaatattgcatggagaat
gcatttactacatatttaaaaattggatcatcaggtcaaagaaatgctacacgttgtggc
ctttggtgggtagaaatgttgaaggccagagatcagtacaaggaggccgccagtgtatac
ttccgtatctctggtgaggagcctctccattcagcagtaatgctcgagcaagcatcgtac
tgttacttgttttccactccccccatgttgcgcaagtacgggtttcatcttgttctttcc
ggggacctgtataaaaaatgtgatcagataaaacatgcaattcgaacatacaaatgtgct
ctttctgttttcaagggaactacatggaggcacattagagaccatgttcatttccacata
ggaaagtggtatggtttcttggggatctttgatgttgctatcaaaaatatgttggaggtt
ctagcttgtggtcatcaatctaagacaacacaggagttattcctaaaggatttccttcag
ataattcagcaaacaggcaaaacatatgaggttccaaagcttcaattaccagtaatcaac
atcccttcagtcaaagtggtatacgaggatcatcgtacctatgcatcccaagcagctgtt
catgtcaaagaaagtctgtggcggtcattagaggaagacatgattccaacattgtcaagt
aagagtaattggctggaattgcaatctaaaatgttgccaaaaaagttaagagaatcaaat
atttgtgttgctggggaggctattgggataaccattgaattcaaaaatccacttcaaata
cctatttcaatatctggtgttaccctaaattgcgaacattctccagcagtatctgaaccg
aatgcaaataattcaattggtgagcaaaatggtgagacatcaaacaaatcagccactagt
gggaattgtgcttctgatacatcttcatttacattatcggaggctgatgttgccttagga
gaaggtgaaacagttttggtacagctaacagttactccaagagcagaaggtactctcaag
atagttggtataaggtggaagctgtcaggttcattgggaggattttgtacttttgattcc
gacttagtcagaaagaaagttatgaaaggaaacaggaaatctaaacgatctacattcgat
aacctgaagttcttagtcataaagagtttaccaaagcttgagggcttcattcatcacctc
ccggaaacagtttatgttggtgatttgcggtgtatcgctctggagttgaaaaatccatct
aaaattccaataaaaaagttgaagatgaaggtcagtccgcctaggtttctccaaattgga
cacaaggaagatctggaagttcaatttcctgcttgcttggaaagaaaaagttcaaaacaa
aggtctttgaggtcaaagactgataaagtatcagatgacattttttcatttcccgaggac
acatcaattgcagatggaactccaatctcatggcctctctggcttagggctgctgctccc
gggaaaatatctttatatttatcagtatactatgagatgggagacatatcaagtgtgatg
acatatcgtatcttacgtgtgcacttcaatatagaggtgctaccatctttggacgtgtct
ttccaaatcagccctcgtccatctagactgcaggagttccttgtccaaatggatgttgtc
aataggtctagctcaaaaggctttcaggttcaccaattgtcatctgttggggatgaatgg
gagatatcattgctcgaaccaactaaggtcctcccttcagattttctacttgctggtcaa
gcaatttcatggtttctcaagctcaagaattgcaggtcggtaactgatcaagacagtgct
tcttctctttgcccttcggtgaaggcagatgtcaacttgctctgcggaagtgaaatggtt
tttgatctatacagctctcccttgtctgagtttcaccattatgaacgagtacatcagaga
atatcggatcaggagcacgaggacacggttgactttatattggtatccagatcacagtgt
gaggagaatgatcgcgcaaatattttctcccatcacatatgtcaccgcagtgtcagaaca
agtagtccgatacggtggataatagatggcccccgaactgtaaaacgtgattttaaggaa
cctttctatgcgattacactaaagatgatagtccacaattcctccgatgatgttgtgtcc
attcgctgtaacccctctgattctgcagtcaacatcagctcatcaggaactacatctgca
gcttctggaaatgaagtaggctggcacgatttgtcactgtcaaacgacatcaaaatcaca
cctgataccccaggaactcgagtagtgaagccaatgtcgtctgatccagttccgtctttc
atctggtcagcttcaagttctactcattttacactcgatccgttatcttctagggaaact
cctatggaaatttgtgtattttcacctggcacatttgatctatcaaactactcattgcac
tggagtctttcatccccgagcgatcaacgcgatgaatcgagagcttcatctggaacatgt
caaggtcatccattctacataacagtgctgcaacaagattga
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