Solanum pennellii: 107011177
Help
Entry
107011177 CDS
T04130
Name
(RefSeq) calcium permeable stress-gated cation channel 1-like
KO
K21989
calcium permeable stress-gated cation channel
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spen02000
]
107011177
Transporters [BR:
spen02000
]
Other transporters
Pores ion channels [TC:
1
]
107011177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
107011177
NCBI-ProteinID:
XP_015066050
LinkDB
All DBs
Position
2:complement(48801866..48814545)
Genome browser
AA seq
767 aa
AA seq
DB search
MATLGDIGLAAAINIISALIFLVAFAILRLQPFNDRVYFPKWYLKGLRHSPTHSGAFVTK
FVNVDWRAYIRFLNWIPDALKMPEPELIDHAGLDSAVYLRIYLLGLKIFVPITLLAWAIL
VPVNWTNSTLTKSDFTYSDIDKLSISNVPLGSLRFWTHIIMAYAFSFWTCYVLKTEYAKV
AAMRLQFVASEERRPDQYTVLVRNVPPDADESVSECVEHFFLVNHQDHYLMHQGVYNANK
LAKLVKEKKSKQNWLDYYQLKYSRDQSKRPTMKTGFLGCFGAKVDAIEHQIAEIERLTKE
IAEEKQRVEKDPKSTMPASFVSFKSRWGAAVCAQTQQSRNPTLWLTEWAPEPRDVFWDNL
AIPYVSLTIRKLIIAVAFFFLTFFFMIPIAFVQTLASLEGIRKKAPFLKVIIDEPFIKAF
IQGFLPGIALKIFLIFLPTILMMMSKFEGWLSISALERKSASKYYIFTIVNVFLGNIIAG
AAFEQLSTFLNQSANQIPKTIGVAVPMKASFFITYVMVDGWAGIAGEILRLKPLIFYHLK
NFFLVKTEKDREEAMDPGSVGFNTGEPQIQLYFLLGLVYAVVTPFLLPFILVFFGLAYVV
YRHQIINVYNQEYESAAAFWPDVHGRIIFALCFSQLSLLGLLSTKHATQSAPFLIALPVL
TISFHLYCKGRYEPAFTKYPIQEARMRDTLEQAREPNLNLKGYLQNAYVHPVFKDDDEDE
DEDFMMKLETDSVLVPTKRQSRMNTPVPSKVSAGSSPSLPDAVTHEH
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttggagatataggccttgcagcagcaataaatattatatctgccttgatc
tttcttgtggcatttgcaattttgcggctccaaccattcaatgacagagtttatttcccc
aaatggtatcttaaggggctgagacacagtcccacccactctggggcattcgtcaccaaa
tttgttaatgttgattggagagcatatataaggtttctgaactggataccagatgctctg
aaaatgcctgaacctgagcttattgaccatgcagggttggactctgctgtttatttgcgc
atatacttgctagggctaaaaatctttgttcccataacgttgcttgcatgggctatcctg
gtacctgtaaattggacaaatagcactctgacaaaatcagactttacttatagtgacatt
gataagctttccatttcaaatgttccgcttggatcactcaggttttggactcatattatt
atggcttatgccttctcattctggacctgctatgtcttaaaaactgagtatgcaaaagtt
gcagccatgaggttgcagtttgtcgcctctgaagaacgtcgtcctgaccaatatacagtc
cttgttaggaatgttccgccagatgctgatgaatcagttagtgaatgtgtggagcacttt
ttcctggttaaccatcaagatcattatctcatgcatcagggtgtttataatgccaacaaa
ctagcaaaattggtgaaggagaagaagagtaagcaaaattggctcgactattaccaactt
aagtactctagggatcaatcaaaacggcctacgatgaagactggtttccttggatgcttt
ggagcaaaagtcgacgcaattgagcatcagattgctgaaattgagagattgacaaaagag
atagctgaagagaaacaaagggtagaaaaagacccaaagtctaccatgcctgcatcattt
gtctccttcaaatcgcggtggggtgctgctgtttgtgcacaaacacagcaatccagaaat
ccaaccttgtggttgacagaatgggctccagagccacgtgatgtattttgggacaacctg
gcaatcccctatgtttctttgacaattaggaagctcatcattgctgttgccttctttttt
ctgacattcttcttcatgatcccgattgcatttgtccaaacccttgccagccttgagggg
attaggaagaaagcaccatttctgaaagttatcattgacgaacctttcatcaaggcgttc
atccaaggttttctacctgggattgctttgaagatctttctcatatttctgccaactata
ttgatgatgatgtccaaatttgagggctggctaagcatatcagctctagagaggaaatct
gcgtctaaatactacatcttcactatcgtgaatgtgttcctcgggaacataattgcagga
gctgcatttgaacaactaagtacctttctcaatcagtcggcaaaccaaatccctaaaacg
attggtgtcgcagttcctatgaaagcatccttcttcataacctacgtaatggttgacggc
tgggctggtattgctggagagatcctaaggctgaagccgctaatattttaccacttgaag
aactttttcttggttaagacggaaaaagatagagaagaggcaatggatcctggaagcgtt
ggtttcaacacaggggaaccacagatacaattatatttcttattggggcttgtttatgct
gtggtcacaccatttctgcttccgttcatattggtcttctttggcctcgcatatgtagta
tatcgtcatcagattataaatgtttacaatcaggagtacgaaagtgcagcagcattctgg
ccagatgttcatggacgtataattttcgcactgtgcttttctcagttatctttactaggc
ttactaagtacaaaacatgctactcagtcagcacctttcctgattgcccttcccgtgctg
accatctcatttcacttgtactgcaaaggtcgttatgagccagctttcaccaaatatccg
atacaggaagcaaggatgagagatactctggaacaagcaagggaaccgaatcttaatctg
aagggctaccttcaaaatgcttatgtgcatcctgttttcaaagacgacgatgaagatgaa
gatgaagactttatgatgaaactggagaccgatagcgttcttgtccccacaaaacgccag
tcaagaatgaatacaccagttcccagcaaagtcagcgctggctcatctccatctcttcct
gatgcagttactcatgaacattaa
DBGET
integrated database retrieval system
