KEGG   Solanum pennellii: 107021447
Entry
107021447         CDS       T04130                                 
Name
(RefSeq) RING-box protein 1-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
spen  Solanum pennellii
Pathway
spen03420  Nucleotide excision repair
spen04120  Ubiquitin mediated proteolysis
spen04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107021447
   04120 Ubiquitin mediated proteolysis
    107021447
  09124 Replication and repair
   03420 Nucleotide excision repair
    107021447
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:spen04121]
    107021447
   03400 DNA repair and recombination proteins [BR:spen03400]
    107021447
Enzymes [BR:spen01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     107021447
Ubiquitin system [BR:spen04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   107021447
  Multi subunit Ring-finger type E3
   SCF complex
    Ring finger protein
     107021447
   Cul2 complex
     107021447
   Cul3 complex
     107021447
   Cul4 complex
     107021447
   Cul7 complex
     107021447
   Cul8 complex
     107021447
   Cul9 complex
     107021447
DNA repair and recombination proteins [BR:spen03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      107021447
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      107021447
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_11
Other DBs
NCBI-GeneID: 107021447
NCBI-ProteinID: XP_015077602
LinkDB
Position
6:49985199..49988522
AA seq 118 aa
MSTDVEMAAADEGSNVTAPPCCSSSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 357 nt   +upstreamnt  +downstreamnt
atgtctacagacgtcgagatggctgccgccgatgaaggatccaacgttaccgcacctcca
tgctgttcttcttcttcgaagaaacccaagcgttttgagatcaaaaagtggaacgctgtc
tctttatgggcttgggatattgttgtagacaactgtgctatttgcaggaaccatatcatg
gatctctgcattgaatgtcaagctaatcaagctagtgctactagcgaggagtgcactgtt
gcctggggtgtatgtaatcatgccttccactttcactgcatcagtcgatggctcaagacc
cgtcaagtgtgcccactagataacagtgagtgggagtttcagaagtatggtcactag

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