Solanum pennellii: 107021447
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Entry
107021447 CDS
T04130
Name
(RefSeq) RING-box protein 1-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
spen
Solanum pennellii
Pathway
spen03420
Nucleotide excision repair
spen04120
Ubiquitin mediated proteolysis
spen04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107021447
04120 Ubiquitin mediated proteolysis
107021447
09124 Replication and repair
03420 Nucleotide excision repair
107021447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107021447
03400 DNA repair and recombination proteins [BR:
spen03400
]
107021447
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
107021447
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
107021447
Multi subunit Ring-finger type E3
SCF complex
Ring finger protein
107021447
Cul2 complex
107021447
Cul3 complex
107021447
Cul4 complex
107021447
Cul7 complex
107021447
Cul8 complex
107021447
Cul9 complex
107021447
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
107021447
TCR (transcription coupled repair) factors
Cul4-CSA complex
107021447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
107021447
NCBI-ProteinID:
XP_015077602
LinkDB
All DBs
Position
6:49985199..49988522
Genome browser
AA seq
118 aa
AA seq
DB search
MSTDVEMAAADEGSNVTAPPCCSSSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagacgtcgagatggctgccgccgatgaaggatccaacgttaccgcacctcca
tgctgttcttcttcttcgaagaaacccaagcgttttgagatcaaaaagtggaacgctgtc
tctttatgggcttgggatattgttgtagacaactgtgctatttgcaggaaccatatcatg
gatctctgcattgaatgtcaagctaatcaagctagtgctactagcgaggagtgcactgtt
gcctggggtgtatgtaatcatgccttccactttcactgcatcagtcgatggctcaagacc
cgtcaagtgtgcccactagataacagtgagtgggagtttcagaagtatggtcactag
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