Solanum pennellii: 107031298
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Entry
107031298 CDS
T04130
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K05610
ubiquitin carboxyl-terminal hydrolase L5 [EC:
3.4.19.12
]
Organism
spen
Solanum pennellii
Pathway
spen03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107031298
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spen01002
]
107031298
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107031298
Enzymes [BR:
spen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107031298
Peptidases and inhibitors [BR:
spen01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
107031298
Ubiquitin system [BR:
spen04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
107031298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
DNA_repr_REX1B
HTH_63
Trehalose_PPase
DUF1690
DUF6779
Motif
Other DBs
NCBI-GeneID:
107031298
NCBI-ProteinID:
XP_015088101
LinkDB
All DBs
Position
9:22308581..22316397
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AA seq
334 aa
AA seq
DB search
MSWCTIESDPGVFTELMQQMQVKGVQVEELYSLDLDELNSLRPVFGLIFLFKWRPGEKDD
RLVIKDPNPNLFFASQVINNACATQAILSILLNSPDVDIGPELSALKEFTKNFPPELKGL
AINNSEAIRTAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPIS
LGPCPGGQGDIEWLRMVQPVIQERIERYSQSEIRFNLMAVVKNRKEVYTAELKELQKRRE
RILQQLAASQSERMVDSSQVESLNKSLAEVNSGIEAVSDKILREEEKFKKWKTENIRRKH
NYIPFLFNFLKILAEKKQLRPLIEKAKQKTTNPR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggtgcactatcgagtctgatcctggggtttttaccgaacttatgcagcagatg
caagtaaaaggtgtgcaggttgaggagttgtattctttggatcttgatgagctcaacagt
cttaggcctgtgttcggtttgatattccttttcaaatggcgtcctggtgaaaaagatgat
cgccttgtgatcaaggacccaaacccaaacctattctttgctagtcaggtgataaacaat
gcttgtgctacccaagcaatcctttcaatcctcctgaacagtccagatgttgatattggc
ccagaattatctgcactaaaagaattcacaaagaatttcccaccggagcttaaaggttta
gctatcaataacagtgaagcaattcgcacagcacataatagttttgcaagacctgagcca
tttgtgcctgaggagcagaaagctgctggcaaagatgatgatgtatatcattttatcagc
tatatacctgtggacggtgtgttgtatgagcttgatggattgaaggagggaccaatcagt
cttggaccatgccctggtggacaaggtgatattgagtggttgcgcatggtgcaaccagtt
attcaggaacgtattgagaggtattcccaaagtgaaataagattcaatctgatggctgta
gtaaagaacaggaaagaggtgtatactgcagagctgaaggagcttcaaaagaggagggag
cgtattctgcaacagctggctgcatcccagtcggagagaatggtggatagcagccaagtg
gaatcactaaataaatccttagcagaggtaaattctggtattgaagctgttagtgataag
atattgagggaggaggagaagttcaagaaatggaaaactgaaaatatccgtcggaagcac
aactatataccatttctgttcaactttttgaaaattctagctgaaaagaagcagctgaga
cctcttatagagaaggccaaacagaaaaccaccaatcctagatga
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