Solanum pennellii: 107031600
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Entry
107031600 CDS
T04130
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
spen
Solanum pennellii
Pathway
spen03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107031600
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spen01002
]
107031600
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107031600
Enzymes [BR:
spen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107031600
Peptidases and inhibitors [BR:
spen01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107031600
Ubiquitin system [BR:
spen04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107031600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Ribosomal_L37ae
Motif
Other DBs
NCBI-GeneID:
107031600
NCBI-ProteinID:
XP_015088511
LinkDB
All DBs
Position
9:complement(82837631..82843709)
Genome browser
AA seq
1054 aa
AA seq
DB search
MVKKAKRKARGGAKEKQNRMASPNPIPQQDAQNVNAPEDGVTAVNEKKICPHIDKGIDVE
KVSAKLGSSGPVRCEDCREGAANRRAAKGKGKHGKKKGGGESKSASKAIWVCLECGHFSC
GGAGFPTTPQSHAVRHARQYHHHLAVQFENPQLRWCFPCDRLIPAEKVEDGTEQKDVLQD
IAKMIKGRPSEGPSLDAEDVWFGRGNITSGIKSEASLDIGAYRKSGHIVRGLHNLGNTCF
FNSIIQNLLAVNRLRDYFLELDECGGPLAAAFKKLFTETSIGDASRSAINPKSFFGSLCA
KAPQFKGYQQHDSHEFLHSLLDVLCSEELTARKKLKSSQDQVKSPTYVDTIFGGRLSSTV
TCLECGHSSLVYEPLLDLSLPVPTKKTPSKKAQPVSRMKKAKHAPKRSGRLCPKINRDAA
SPNSQSAQESGSKSFCQVQSSAPIAEGMEVPSDCALVDSLDASSMADDMGLSSHNISSSM
KSNNEEDVNNVTGRPTSVDNFSWLDYLDQDILPNVNEQNDDGVAGQSTSMDNFTCSEYLD
QDTMPKGDDVASQADILSNQGCAAENVVQLNVSLQNDLNAPSDSKLTLGQEACSSDNFMC
LDDQGLSKSPDCNIASQFGEEVEVKDWNAIEVEHNSASSSRFLSVDSNLDSSASLEEVEA
PLQVKDSEILLLPYKEETSTTNDVLKGESEVSPDAAGCEQDILDFDGFGGLFNEPEPVAG
PAEKPLLSGAASVANGFGEASSAIGNSSESDPDEVDSTDAPVSVESCLACFTKPELLSKT
EHAWQCENCAKLLREQRIKLKKKLLKPESEDLGNAPEDSNSKEIDQRATNGSAGKGLSDA
FDDRLVHQNGTNGYSNCMPETSHRADEDPVSNPSEGGVDSSQEEACSLVNCDSQTDGVQL
DEGSAYYESGESENETDSKGVKVERDATKRILIDKAPPILTIHLKRFSQDARGRLSKLSG
HVSFRDTIDLTTFVDPRCLQKEAYKYRLLGVVEHSGTMRGGHYVAYIRGGPKIAGKDKDA
EDYVWYYASDAYVREVPLEEVLQSEAYILFYEEI
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagaaggctaagagaaaggctagaggtggtgcgaaggagaagcagaatcgcatg
gcatcaccaaatcccatccctcaacaagacgctcaaaatgttaatgcacctgaggatgga
gttacagctgtgaatgaaaaaaagatatgcccccatattgataagggtattgatgtggag
aaagtctctgctaaacttggctcttcaggacctgttaggtgtgaagattgcagggaagga
gcagctaatcgacgggctgctaaaggaaaaggtaaacatggaaaaaagaagggaggtgga
gaatcaaagtcggcgtctaaagccatttgggtctgtttagaatgtggtcatttttcgtgc
ggaggtgctggatttcctactactcctcagagccatgcagttcggcatgcaagacagtac
caccaccacttggctgtacaatttgaaaatcctcaattgcgatggtgtttcccgtgcgat
agactaattcccgctgaaaaggtagaggatggcactgaacaaaaagatgtattacaggac
attgccaagatgattaaagggcggccatctgaagggcctagtcttgatgctgaggatgtt
tggtttgggagggggaatatcacgagcgggatcaagtcagaggctagtcttgacattggt
gcctacaggaaaagtggccacattgttaggggattgcataatttagggaacacttgcttt
ttcaattcaataattcaaaacctactagcagtgaatagattgcgcgattactttcttgaa
ctggacgaatgtggtggtcctcttgctgctgcttttaaaaagctctttactgagacaagt
attggggatgcctcaagaagtgctattaatccaaaatccttttttggttctctgtgtgcg
aaggctccacagtttaagggatatcaacagcacgacagtcacgagtttcttcatagtttg
cttgacgttttgtgttccgaggaattgactgccagaaaaaaactcaagtcttctcaggat
caagtcaagtctcctacttatgtcgatactatctttgggggtcgtctctctagtactgtt
acttgtctggagtgtggacactcttcattagtctatgagccattattggatctttcatta
ccggttcccactaagaagactccgtctaaaaaagctcaaccagtttcccgtatgaagaag
gcaaaacatgctccaaagagaagtggaagactgtgccccaaaattaatagagatgcagct
tctcctaattctcaaagtgctcaagaaagtggtagcaagtcgttctgccaggtacagtct
agtgcgcccatcgctgagggaatggaagttccctctgattgtgcattggtagattctctt
gatgctagttctatggctgatgatatgggcttatcttcacataatatatcttcctctatg
aagtctaataatgaggaagatgtcaacaatgtcactgggcggccgacttcagtggacaat
ttttcatggttggattatcttgatcaagatatcctgcctaatgttaatgaacaaaatgac
gatggtgttgctggacagtcgacttcaatggacaattttacatgttcggagtatcttgat
caagatactatgcctaagggtgatgacgttgcatcacaagctgatattctgtctaatcag
ggttgtgcagctgaaaacgttgttcaacttaatgtctccttgcaaaatgatctgaatgct
cctagtgacagtaaattgacattgggtcaggaagcttgttcttcagataattttatgtgc
ttggatgatcaaggactatctaagtcaccagactgcaatatagcttctcaatttggtgaa
gaagtagaagttaaagattggaatgctatagaagttgagcataactcagcatcaagcagc
cggttcctctcagtggattcaaatcttgattcatcagcaagcctcgaggaagttgaagcc
ccgttacaggtaaaagattcagaaattctgttgcttccatataaagaagaaacctcaact
accaatgatgtactgaaaggagaaagcgaggtgtccccagatgctgctggctgtgaacaa
gatattttggactttgatggttttggtggcctgtttaatgaacctgagccggttgcaggg
ccggctgaaaagcctttactaagtggtgctgcttcagtggcaaatggattcggagaagct
agttctgctattggaaatagctctgaatctgatccagatgaggttgacagtactgatgct
cccgtgtcagtggagagttgtttggcttgtttcacaaagcctgagcttctatctaaaaca
gaacatgcttggcaatgtgaaaactgtgcaaaacttctacgagaacagaggattaaattg
aagaagaaattgctgaaacctgaatcagaggacctggggaatgcgccagaggatagtaat
tcaaaggaaattgatcagagagccactaatggaagtgccggtaaaggtttgtcagatgct
tttgatgataggttggtgcaccaaaatggaacaaatggttactcgaactgcatgccagaa
actagccacagagctgatgaagatccagtctctaacccgtcagaaggtggggtagattca
agtcaggaagaagcttgtagtctagtaaattgcgatagtcagaccgatggagttcagttg
gatgaaggttctgcttattatgaatctggagaaagtgagaacgagaccgattctaaaggt
gtcaaagtggaaagagatgcaactaaaaggatactcattgataaagcccctcctattttg
acaattcatctaaagaggttcagccaagatgctcgcggacgtttaagtaagctgagtggc
cacgtgagtttcagagatactattgatctcacaacctttgttgatcccaggtgcttgcag
aaggaggcttacaagtaccgacttttaggtgtcgtggaacattcagggactatgagagga
ggtcactatgttgcatatattagaggaggcccaaagatcgctgggaaagacaaggacgcg
gaagattatgtgtggtattatgccagtgatgcctacgtacgagaggtcccattggaagaa
gttcttcaaagtgaagcctatattttgttctacgaagaaatttga
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