Sphingobium sp. EP60837: EP837_01150
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Entry
EP837_01150 CDS
T04432
Name
(GenBank) UvrABC system protein
KO
K03702
excinuclease ABC subunit B
Organism
sphb
Sphingobium sp. EP60837
Pathway
sphb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EP837_01150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphb03400
]
EP837_01150
DNA repair and recombination proteins [BR:
sphb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EP837_01150
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EP837_01150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
SWI2_SNF2
DUF87
Microtub_bd
UB2H
AAA_16
Peripla_BP_6
AAA_22
AAA_7
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ANI77584
UniProt:
A0A173KV11
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All DBs
Position
1:1171775..1173958
Genome browser
AA seq
727 aa
AA seq
DB search
MTIQIRTTLDEPETGEGFVPHRPARPEKSEGGRPFKLVSDYEPSGDQPTAIAELVETALQ
GEKDQVLLGVTGSGKTFTMAKVIEALQRPALVLAPNKILAAQLYGEFKSFFPENAVEYFV
SYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERDDVLIVASVSCLYGIGS
VETYSAMTFSMKKGQVEDQREIIRKLVALQYKRNDAAFARGNFRVKGDNLEIFPSHYEDT
AWRVSFFGNEIEDIVEFDPLTGKKVATLEYVKVFPNSHHVTPGPTLKQAMEAIRHELTER
LKELTAEGKLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYLP
ENALLFVDESHQTVPQIGAMARGDHRRKITLAEYGFRLPSCIDNRPLRFNEWDAMRPQTV
SVSATPGPWEMNQTGGTFSEQVIRPTGLIDPPVEIKPVEDQVDDLINECRKVAAQGYRTL
VTTLTKRMAEDLTEFMHEAGIKVRYMHSDVETLERIELIRDLRLGVYDVLIGINLLREGL
DIPECGLVAILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRITGSMERALNETSR
RREKQMEYNAEHGITPTTIKRHIGDIIAHVASKDQVTIDTGIDDRPHLVGHNLRAYIEDL
EKKMRTAAADLEFEEAGRIRDEIRKLEAEELGLPADQQVAAPRGRATEGKPGTRKLRYGK
TQRKFGR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgacaattcaaatccgcaccacgctggacgagcccgagaccggcgaaggcttcgtcccc
caccgccccgcgcgcccggaaaagagcgagggagggcgaccgttcaagctggtttcggac
tatgagccatcgggcgaccagcccacggccatcgccgaactggtggaaacggcgctgcag
ggcgagaaggaccaggtgctgctgggcgtcacgggctcgggcaagacctttaccatggca
aaggtgatcgaggcgttgcagcggccagcgctggtgctggcgccgaacaaaatcctcgcg
gcgcagctttacggggagttcaagagcttcttcccggagaatgccgtcgaatatttcgtc
agctattatgactattaccagcccgaagcctatgtgccgcggtcggacacctatatcgag
aaggagtcgagcgtaaacgaggcgatcgaccggatgcggcactcggccacgcgggcgctg
ctggagcgggacgatgtgctgatcgtcgcttcggtgtcctgcctctatggcatcgggtcg
gtggaaacctattcggccatgaccttctcgatgaagaagggccaggtcgaggaccagcgg
gagatcatccgcaaactggtggcgttgcaatataagcgcaacgatgcggccttcgcgcgc
gggaatttccgggtgaagggggataatctggagattttcccgtcccactatgaggatacc
gcctggcgggtcagctttttcggcaatgagatcgaggacattgtcgaattcgatccgctg
acggggaagaaggtcgctacgctggaatatgtgaaggtctttcccaacagccaccatgtc
acgccggggccgacgctgaagcaggcgatggaggcgatccggcatgaactgaccgagcgg
ctgaaggagttgaccgccgagggcaagctgctggaagcgcagcggctggagcagcggacc
aatttcgatctggagatgatcgcggcgaccgggagttgcgcggggatcgagaattattcg
cgcttcctgaccgggcgtctgccgggcgagccgccaccgactttgttcgaatatctgcca
gaaaacgcgctgctgttcgtagatgagagccaccagacggtgccgcagatcggcgcgatg
gcgcgcggcgaccatcggcgcaagatcacgctcgctgaatatggcttccgcctgccgagc
tgcatcgacaaccggccgctgcgcttcaacgagtgggacgcaatgcggccgcagacggtg
agcgtgtccgcaacgccggggccgtgggagatgaatcagacggggggcaccttctccgaa
caggtcatccgcccgactggcctcatcgacccgccggtggagatcaagccggtcgaggat
caggtggacgacctgatcaacgaatgccgcaaggtcgcggcgcaaggataccgcacgctt
gtcaccacgctgaccaagcggatggcggaggacctgaccgagttcatgcatgaggcgggg
atcaaggtccgttatatgcattcggacgtcgagacactggagcgtatcgagctgatccgc
gacctgcggctgggcgtctatgacgtgctgatcggcatcaacctgctgcgcgaggggctg
gacattcccgaatgcgggctggtggcgatcctcgacgcggacaaggagggcttcctgcgt
tccgaaacctcgctgatccagaccatcggccgcgcggcgcgcaatgtcgatgggcgggtg
atcctctatgccgaccggatcaccgggagcatggagcgagcgctcaatgaaacctcgcgg
cggcgcgagaagcagatggaatataatgccgagcatggcatcacgccgaccacgatcaag
cgccatatcggcgacatcatcgcccatgtggcgagcaaggatcaggtcacgatcgacaca
gggatcgacgaccggccgcacctcgtcggccacaatctgcgcgcttatatcgaggatctc
gaaaagaagatgcggaccgccgccgcagatctggagtttgaggaagccgggcgcatccgc
gacgaaatccgcaagctggaggcggaagaacttggcctgcccgccgaccagcaggtggcg
gctccccgcgggcgggcgaccgaggggaagccgggcacgcggaagctgcgctacggcaag
acccagaggaagttcgggcgctga
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